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Crystal Structure of FtsZ with Z1220452176
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-721 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.59 52.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.306 α = 90 b = 88.306 β = 90 c = 178.684 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-721 ftsz-721 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-721 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-721 2.14 44.153 98.5 0.269 0.28 0.077 0.995 7.8 13.1 42727
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-721 2.14 2.177 100 2.22 2.308 0.627 0.344 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.14 44.192 42718 2187 98.485 0.181 0.1789 0.1865 0.22 0.2234 34.897
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.017 0.009 0.017 -0.056
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.245 r_dihedral_angle_6_deg 13.482 r_dihedral_angle_2_deg 9.969 r_lrange_it 8.857 r_lrange_other 8.77 r_scangle_it 7.252 r_scangle_other 7.25 r_dihedral_angle_1_deg 6.461 r_scbond_it 4.625 r_scbond_other 4.624
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.245 r_dihedral_angle_6_deg 13.482 r_dihedral_angle_2_deg 9.969 r_lrange_it 8.857 r_lrange_other 8.77 r_scangle_it 7.252 r_scangle_other 7.25 r_dihedral_angle_1_deg 6.461 r_scbond_it 4.625 r_scbond_other 4.624 r_mcangle_it 4.285 r_mcangle_other 4.285 r_mcbond_it 2.839 r_mcbond_other 2.828 r_angle_refined_deg 1.588 r_angle_other_deg 0.554 r_symmetry_nbd_other 0.445 r_symmetry_xyhbond_nbd_refined 0.248 r_nbd_refined 0.218 r_symmetry_nbd_refined 0.192 r_xyhbond_nbd_refined 0.187 r_nbd_other 0.179 r_nbtor_refined 0.169 r_symmetry_nbtor_other 0.131 r_symmetry_xyhbond_nbd_other 0.102 r_chiral_restr 0.071 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 306 Heterogen Atoms 21
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction