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Crystal Structure of FtsZ with Z1217960891
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-633 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.62 52.99
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.629 α = 90 b = 88.629 β = 90 c = 179.022 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-633 ftsz-633 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-633 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-633 1.867 44.314 100 0.222 0.231 0.063 0.997 9.1 13.4 65821
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-633 1.867 1.899 100 2.833 2.944 0.799 0.358 13.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.867 44.354 65809 3351 99.939 0.182 0.1803 0.1885 0.2141 0.2199 28.78
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.014 -0.007 -0.014 0.045
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.497 r_dihedral_angle_6_deg 14.468 r_dihedral_angle_2_deg 9.542 r_lrange_it 7.976 r_lrange_other 7.916 r_dihedral_angle_1_deg 6.737 r_scangle_it 6.494 r_scangle_other 6.493 r_scbond_it 4.204 r_scbond_other 4.192
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.497 r_dihedral_angle_6_deg 14.468 r_dihedral_angle_2_deg 9.542 r_lrange_it 7.976 r_lrange_other 7.916 r_dihedral_angle_1_deg 6.737 r_scangle_it 6.494 r_scangle_other 6.493 r_scbond_it 4.204 r_scbond_other 4.192 r_mcangle_it 3.707 r_mcangle_other 3.706 r_mcbond_it 2.515 r_mcbond_other 2.509 r_angle_refined_deg 1.795 r_angle_other_deg 0.712 r_symmetry_nbd_other 0.655 r_symmetry_xyhbond_nbd_refined 0.227 r_nbd_refined 0.221 r_xyhbond_nbd_refined 0.184 r_symmetry_nbtor_other 0.178 r_nbd_other 0.174 r_nbtor_refined 0.167 r_symmetry_nbd_refined 0.16 r_symmetry_xyhbond_nbd_other 0.109 r_chiral_restr 0.083 r_bond_refined_d 0.009 r_bond_other_d 0.007 r_gen_planes_refined 0.007 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 323 Heterogen Atoms 50
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction