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Crystal Structure of FtsZ with Z32327641
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-573 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.58 52.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.263 α = 90 b = 88.263 β = 90 c = 177.685 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-573 ftsz-573 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-573 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-573 2.017 44.132 100 0.224 0.233 0.064 0.997 9.2 13.3 51427
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-573 2.017 2.052 100 2.395 2.493 0.69 0.336 13
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.017 44.17 51425 2580 99.967 0.183 0.1813 0.189 0.2217 0.2248 36.113
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 0.005 0.01 -0.032
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.55 r_dihedral_angle_2_deg 13.856 r_dihedral_angle_6_deg 13.659 r_lrange_it 9.416 r_lrange_other 9.325 r_scangle_it 7.704 r_scangle_other 7.703 r_dihedral_angle_1_deg 6.59 r_scbond_it 4.97 r_scbond_other 4.969
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.55 r_dihedral_angle_2_deg 13.856 r_dihedral_angle_6_deg 13.659 r_lrange_it 9.416 r_lrange_other 9.325 r_scangle_it 7.704 r_scangle_other 7.703 r_dihedral_angle_1_deg 6.59 r_scbond_it 4.97 r_scbond_other 4.969 r_mcangle_it 4.632 r_mcangle_other 4.632 r_mcbond_it 3.098 r_mcbond_other 3.092 r_angle_refined_deg 1.689 r_angle_other_deg 0.61 r_symmetry_nbd_other 0.522 r_symmetry_xyhbond_nbd_refined 0.227 r_xyhbond_nbd_refined 0.225 r_nbd_refined 0.213 r_nbd_other 0.17 r_nbtor_refined 0.169 r_symmetry_nbtor_other 0.125 r_symmetry_nbd_refined 0.123 r_symmetry_xyhbond_nbd_other 0.119 r_chiral_restr 0.076 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction