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Crystal Structure of FtsZ with Z142383342
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-571 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.58 52.33
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.319 α = 90 b = 88.319 β = 90 c = 177.801 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-571 ftsz-571 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-571 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-571 2.068 44.16 100 0.247 0.259 0.076 0.996 8.4 11.5 47786
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-571 2.068 2.104 100 2.988 3.139 0.959 0.326 10.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.068 44.199 47769 2425 99.923 0.177 0.1748 0.1824 0.2144 0.2192 37.048
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.004 0.002 0.004 -0.014
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.094 r_dihedral_angle_6_deg 13.564 r_lrange_it 9.104 r_lrange_other 9.021 r_dihedral_angle_2_deg 7.619 r_scangle_it 7.575 r_scangle_other 7.574 r_dihedral_angle_1_deg 6.433 r_scbond_it 4.897 r_scbond_other 4.896
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.094 r_dihedral_angle_6_deg 13.564 r_lrange_it 9.104 r_lrange_other 9.021 r_dihedral_angle_2_deg 7.619 r_scangle_it 7.575 r_scangle_other 7.574 r_dihedral_angle_1_deg 6.433 r_scbond_it 4.897 r_scbond_other 4.896 r_mcangle_other 4.542 r_mcangle_it 4.541 r_mcbond_other 3.032 r_mcbond_it 3.031 r_angle_refined_deg 1.684 r_angle_other_deg 0.623 r_symmetry_nbd_other 0.536 r_symmetry_xyhbond_nbd_refined 0.227 r_nbd_refined 0.216 r_xyhbond_nbd_refined 0.214 r_nbd_other 0.183 r_symmetry_nbd_refined 0.171 r_nbtor_refined 0.168 r_symmetry_nbtor_other 0.137 r_symmetry_xyhbond_nbd_other 0.079 r_chiral_restr 0.074 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 37
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction