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Crystal Structure of FtsZ with Z31432226
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-488 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.22
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.744 α = 90 b = 88.744 β = 90 c = 179.446 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-488 ftsz-488 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-488 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-488 1.882 44.372 100 0.186 0.193 0.053 0.998 9.7 13.4 64650
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-488 1.882 1.914 100 3.028 3.147 0.854 0.316 13.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.882 44.411 64637 3287 99.957 0.181 0.1798 0.1875 0.2101 0.2192 33.754
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 -0.005 -0.01 0.033
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.719 r_dihedral_angle_6_deg 14.393 r_dihedral_angle_2_deg 11.111 r_lrange_it 8.589 r_lrange_other 8.553 r_scangle_it 7.186 r_scangle_other 7.185 r_dihedral_angle_1_deg 6.347 r_scbond_it 4.505 r_scbond_other 4.505
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.719 r_dihedral_angle_6_deg 14.393 r_dihedral_angle_2_deg 11.111 r_lrange_it 8.589 r_lrange_other 8.553 r_scangle_it 7.186 r_scangle_other 7.185 r_dihedral_angle_1_deg 6.347 r_scbond_it 4.505 r_scbond_other 4.505 r_mcangle_it 4.207 r_mcangle_other 4.206 r_mcbond_other 2.804 r_mcbond_it 2.801 r_angle_refined_deg 1.609 r_angle_other_deg 0.521 r_nbd_refined 0.218 r_symmetry_xyhbond_nbd_refined 0.198 r_nbd_other 0.19 r_symmetry_nbd_other 0.189 r_xyhbond_nbd_refined 0.175 r_nbtor_refined 0.169 r_symmetry_nbd_refined 0.142 r_symmetry_nbtor_other 0.082 r_chiral_restr 0.074 r_symmetry_xyhbond_nbd_other 0.064 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction