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Crystal Structure of FtsZ with Z100642432
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-464 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.62 53.06
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.651 α = 90 b = 88.651 β = 90 c = 179.205 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-464 ftsz-464 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-464 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-464 1.931 44.326 100 0.207 0.215 0.059 0.998 10.5 13.3 59616
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-464 1.931 1.964 100 2.575 2.678 0.732 0.373 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.931 44.365 59607 3016 99.956 0.182 0.1804 0.1883 0.2133 0.2192 32.213
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.004 0.002 0.004 -0.014
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 15.976 r_dihedral_angle_3_deg 14.698 r_dihedral_angle_6_deg 14.349 r_lrange_it 8.808 r_lrange_other 8.753 r_scangle_it 7.234 r_scangle_other 7.233 r_dihedral_angle_1_deg 6.698 r_scbond_it 4.671 r_scbond_other 4.659
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 15.976 r_dihedral_angle_3_deg 14.698 r_dihedral_angle_6_deg 14.349 r_lrange_it 8.808 r_lrange_other 8.753 r_scangle_it 7.234 r_scangle_other 7.233 r_dihedral_angle_1_deg 6.698 r_scbond_it 4.671 r_scbond_other 4.659 r_mcangle_it 4.081 r_mcangle_other 4.081 r_mcbond_it 2.809 r_mcbond_other 2.807 r_angle_refined_deg 1.738 r_angle_other_deg 0.658 r_symmetry_nbd_other 0.562 r_symmetry_nbd_refined 0.364 r_symmetry_xyhbond_nbd_refined 0.226 r_nbd_refined 0.221 r_xyhbond_nbd_refined 0.198 r_nbd_other 0.187 r_nbtor_refined 0.169 r_symmetry_nbtor_other 0.122 r_chiral_restr 0.083 r_symmetry_xyhbond_nbd_other 0.038 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.006 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 31
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction