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Crystal Structure of FtsZ with Z48847594
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-463 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.714 α = 90 b = 88.714 β = 90 c = 179.482 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-463 ftsz-463 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-463 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-463 2.021 44.357 99.9 0.244 0.253 0.069 0.996 8.7 13.4 52087
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-463 2.021 2.055 100 3.074 3.197 0.877 0.349 13.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.021 44.396 52069 2631 99.82 0.182 0.1803 0.1875 0.2127 0.2191 34.197
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.001 -0.001 -0.001 0.005
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.841 r_dihedral_angle_6_deg 14.244 r_dihedral_angle_2_deg 12.944 r_lrange_it 9.668 r_lrange_other 9.515 r_scangle_it 7.04 r_scangle_other 7.039 r_dihedral_angle_1_deg 6.541 r_scbond_it 4.551 r_scbond_other 4.551
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.841 r_dihedral_angle_6_deg 14.244 r_dihedral_angle_2_deg 12.944 r_lrange_it 9.668 r_lrange_other 9.515 r_scangle_it 7.04 r_scangle_other 7.039 r_dihedral_angle_1_deg 6.541 r_scbond_it 4.551 r_scbond_other 4.551 r_mcangle_it 4.314 r_mcangle_other 4.314 r_mcbond_it 2.949 r_mcbond_other 2.948 r_angle_refined_deg 1.704 r_dihedral_angle_other_2_deg 1.213 r_angle_other_deg 0.636 r_symmetry_nbd_other 0.549 r_symmetry_xyhbond_nbd_other 0.394 r_nbd_refined 0.215 r_nbd_other 0.208 r_symmetry_xyhbond_nbd_refined 0.205 r_xyhbond_nbd_refined 0.2 r_symmetry_nbd_refined 0.17 r_nbtor_refined 0.168 r_symmetry_nbtor_other 0.139 r_chiral_restr 0.077 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 315 Heterogen Atoms 37
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction