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Crystal Structure of FtsZ with Z57778470
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-437 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.29
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.745 α = 90 b = 88.745 β = 90 c = 179.723 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-437 ftsz-437 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-437 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-437 2.057 43.079 100 0.22 0.229 0.063 0.997 9.6 13.4 49580
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-437 2.057 2.092 100 2.756 2.873 0.81 0.354 12.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.057 43.116 49562 2502 99.905 0.181 0.1792 0.1868 0.2116 0.2166 37.164
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.003 0.002 0.003 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.367 r_dihedral_angle_6_deg 14.899 r_lrange_it 9.041 r_lrange_other 8.973 r_scangle_it 7.513 r_scangle_other 7.512 r_dihedral_angle_1_deg 6.578 r_dihedral_angle_2_deg 6.047 r_scbond_it 4.914 r_scbond_other 4.913
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.367 r_dihedral_angle_6_deg 14.899 r_lrange_it 9.041 r_lrange_other 8.973 r_scangle_it 7.513 r_scangle_other 7.512 r_dihedral_angle_1_deg 6.578 r_dihedral_angle_2_deg 6.047 r_scbond_it 4.914 r_scbond_other 4.913 r_mcangle_it 4.63 r_mcangle_other 4.629 r_mcbond_it 3.153 r_mcbond_other 3.151 r_angle_refined_deg 1.681 r_angle_other_deg 0.613 r_symmetry_nbd_other 0.476 r_symmetry_xyhbond_nbd_refined 0.23 r_nbd_refined 0.217 r_nbd_other 0.208 r_xyhbond_nbd_refined 0.205 r_symmetry_nbd_refined 0.191 r_nbtor_refined 0.171 r_symmetry_nbtor_other 0.125 r_symmetry_xyhbond_nbd_other 0.107 r_chiral_restr 0.077 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction