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Crystal Structure of FtsZ with Z31408124
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-421 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.26
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.676 α = 90 b = 88.676 β = 90 c = 179.87 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-421 ftsz-421 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-421 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-421 2.049 44.338 100 0.211 0.219 0.06 0.998 6.7 13.4 50138
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-421 2.049 2.084 100 2.546 2.652 0.741 0.36 12.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.049 44.377 50120 2531 99.932 0.181 0.1792 0.1864 0.2111 0.2179 37.367
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.012 0.006 0.012 -0.039
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.618 r_dihedral_angle_3_deg 14.603 r_lrange_it 8.708 r_lrange_other 8.686 r_scangle_it 7.467 r_scangle_other 7.466 r_dihedral_angle_1_deg 6.488 r_dihedral_angle_2_deg 6.408 r_scbond_it 4.866 r_scbond_other 4.865
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.618 r_dihedral_angle_3_deg 14.603 r_lrange_it 8.708 r_lrange_other 8.686 r_scangle_it 7.467 r_scangle_other 7.466 r_dihedral_angle_1_deg 6.488 r_dihedral_angle_2_deg 6.408 r_scbond_it 4.866 r_scbond_other 4.865 r_mcangle_other 4.515 r_mcangle_it 4.514 r_mcbond_it 3.124 r_mcbond_other 3.123 r_angle_refined_deg 1.647 r_angle_other_deg 0.588 r_symmetry_nbd_other 0.441 r_nbd_refined 0.22 r_symmetry_xyhbond_nbd_refined 0.196 r_xyhbond_nbd_refined 0.189 r_nbd_other 0.182 r_symmetry_nbd_refined 0.178 r_nbtor_refined 0.169 r_symmetry_nbtor_other 0.129 r_symmetry_xyhbond_nbd_other 0.088 r_chiral_restr 0.076 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction