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Crystal Structure of FtsZ with Z975817026
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-400 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.61 52.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.463 α = 90 b = 88.463 β = 90 c = 179.213 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-400 ftsz-400 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-400 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-400 2.178 42.943 100 0.34 0.354 0.097 0.994 6.4 13.4 41444
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-400 2.178 2.215 100 3.25 3.377 0.917 0.461 13.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.178 42.98 40154 2080 96.869 0.194 0.1915 0.1976 0.2362 0.2379 38.762
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.005 0.003 0.005 -0.016
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.758 r_dihedral_angle_6_deg 14.07 r_lrange_it 8.796 r_lrange_other 8.66 r_dihedral_angle_2_deg 7.181 r_scangle_it 6.93 r_scangle_other 6.929 r_dihedral_angle_1_deg 6.845 r_mcangle_it 4.793 r_mcangle_other 4.792
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.758 r_dihedral_angle_6_deg 14.07 r_lrange_it 8.796 r_lrange_other 8.66 r_dihedral_angle_2_deg 7.181 r_scangle_it 6.93 r_scangle_other 6.929 r_dihedral_angle_1_deg 6.845 r_mcangle_it 4.793 r_mcangle_other 4.792 r_scbond_it 4.434 r_scbond_other 4.434 r_mcbond_it 3.11 r_mcbond_other 3.108 r_angle_refined_deg 1.588 r_angle_other_deg 0.592 r_symmetry_nbd_other 0.463 r_nbd_other 0.229 r_nbd_refined 0.226 r_symmetry_nbd_refined 0.211 r_symmetry_xyhbond_nbd_refined 0.211 r_xyhbond_nbd_refined 0.2 r_nbtor_refined 0.17 r_symmetry_xyhbond_nbd_other 0.156 r_symmetry_nbtor_other 0.123 r_chiral_restr 0.074 r_xyhbond_nbd_other 0.032 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 15
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction