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Crystal Structure of FtsZ with Z1983897532
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-395 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.26
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 89.026 α = 90 b = 89.026 β = 90 c = 178.45 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-395 ftsz-395 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-395 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-395 2.033 43.19 99.5 0.312 0.326 0.09 0.985 7.6 13 51039
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-395 2.033 2.068 100 3.4 3.539 0.98 0.695 12.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.041 43.227 47899 2424 94.356 0.205 0.2026 0.2094 0.2428 0.246 35.01
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.003 -0.001 -0.003 0.009
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.777 r_dihedral_angle_6_deg 14.522 r_dihedral_angle_2_deg 9.475 r_lrange_it 9.29 r_lrange_other 9.232 r_scangle_it 7.883 r_scangle_other 7.882 r_dihedral_angle_1_deg 6.598 r_scbond_it 5.17 r_scbond_other 5.168
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.777 r_dihedral_angle_6_deg 14.522 r_dihedral_angle_2_deg 9.475 r_lrange_it 9.29 r_lrange_other 9.232 r_scangle_it 7.883 r_scangle_other 7.882 r_dihedral_angle_1_deg 6.598 r_scbond_it 5.17 r_scbond_other 5.168 r_mcangle_it 4.839 r_mcangle_other 4.839 r_mcbond_other 3.281 r_mcbond_it 3.267 r_angle_refined_deg 1.841 r_angle_other_deg 0.6 r_symmetry_xyhbond_nbd_refined 0.309 r_symmetry_nbd_refined 0.221 r_nbd_refined 0.218 r_symmetry_nbd_other 0.193 r_nbd_other 0.185 r_xyhbond_nbd_refined 0.18 r_nbtor_refined 0.172 r_symmetry_nbtor_other 0.085 r_chiral_restr 0.081 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 305 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction