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Crystal Structure of FtsZ with Z56618096
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-357 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.56 51.88
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.207 α = 90 b = 88.207 β = 90 c = 176.593 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-357 ftsz-357 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-357 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-357 2.101 44.104 98.3 0.21 0.218 0.06 0.998 9.8 13 44371
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-357 2.101 2.137 100 2.118 2.211 0.631 0.363 12.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.101 44.142 44346 2250 98.178 0.177 0.1747 0.1825 0.2202 0.2222 40.868
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.009 -0.005 -0.009 0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.161 r_dihedral_angle_6_deg 13.204 r_lrange_it 9.765 r_lrange_other 9.71 r_scangle_it 8.431 r_scangle_other 8.429 r_dihedral_angle_2_deg 8.19 r_dihedral_angle_1_deg 6.413 r_scbond_it 5.439 r_scbond_other 5.438
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.161 r_dihedral_angle_6_deg 13.204 r_lrange_it 9.765 r_lrange_other 9.71 r_scangle_it 8.431 r_scangle_other 8.429 r_dihedral_angle_2_deg 8.19 r_dihedral_angle_1_deg 6.413 r_scbond_it 5.439 r_scbond_other 5.438 r_mcangle_other 5.123 r_mcangle_it 5.12 r_mcbond_it 3.447 r_mcbond_other 3.442 r_angle_refined_deg 1.588 r_angle_other_deg 0.527 r_symmetry_nbd_other 0.319 r_symmetry_xyhbond_nbd_refined 0.253 r_nbd_refined 0.215 r_xyhbond_nbd_refined 0.212 r_nbd_other 0.194 r_symmetry_nbd_refined 0.18 r_nbtor_refined 0.168 r_symmetry_xyhbond_nbd_other 0.136 r_symmetry_nbtor_other 0.12 r_chiral_restr 0.071 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.003 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction