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Crystal Structure of FtsZ with Z19733482
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-318 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.61 52.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.568 α = 90 b = 88.568 β = 90 c = 178.797 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-318 ftsz-318 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-318 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-318 2.168 44.284 100 0.285 0.296 0.08 0.995 8.6 13.4 41951
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-318 2.168 2.206 100 2.446 2.541 0.686 0.326 13.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.168 44.323 41945 2171 99.943 0.179 0.1768 0.1842 0.2191 0.2215 36.109
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.001 -0.001 0.003
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.801 r_dihedral_angle_6_deg 14.076 r_lrange_it 8.589 r_lrange_other 8.514 r_dihedral_angle_2_deg 7.52 r_scangle_it 6.992 r_scangle_other 6.991 r_dihedral_angle_1_deg 6.476 r_scbond_it 4.476 r_scbond_other 4.475
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.801 r_dihedral_angle_6_deg 14.076 r_lrange_it 8.589 r_lrange_other 8.514 r_dihedral_angle_2_deg 7.52 r_scangle_it 6.992 r_scangle_other 6.991 r_dihedral_angle_1_deg 6.476 r_scbond_it 4.476 r_scbond_other 4.475 r_mcangle_it 4.391 r_mcangle_other 4.391 r_mcbond_it 2.928 r_mcbond_other 2.92 r_angle_refined_deg 1.593 r_angle_other_deg 0.6 r_symmetry_nbd_other 0.496 r_symmetry_xyhbond_nbd_refined 0.273 r_nbd_refined 0.218 r_nbd_other 0.192 r_xyhbond_nbd_refined 0.188 r_nbtor_refined 0.168 r_symmetry_nbd_refined 0.157 r_symmetry_nbtor_other 0.115 r_symmetry_xyhbond_nbd_other 0.104 r_chiral_restr 0.074 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction