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Crystal Structure of FtsZ with F2111-0067
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-292 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.478 α = 90 b = 88.478 β = 90 c = 178.636 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-292 ftsz-292 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-292 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-292 2.013 44.239 100 0.206 0.214 0.06 0.997 9.7 12.5 52270
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-292 2.013 2.047 100 2.148 2.254 0.665 0.333 10.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.013 44.278 52256 2640 99.954 0.181 0.1795 0.1874 0.2132 0.2176 32.948
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.012 0.006 0.012 -0.039
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.811 r_dihedral_angle_6_deg 14.62 r_dihedral_angle_2_deg 12.22 r_lrange_it 8.655 r_lrange_other 8.641 r_scangle_it 7.318 r_scangle_other 7.317 r_dihedral_angle_1_deg 6.548 r_scbond_it 4.717 r_scbond_other 4.715
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.811 r_dihedral_angle_6_deg 14.62 r_dihedral_angle_2_deg 12.22 r_lrange_it 8.655 r_lrange_other 8.641 r_scangle_it 7.318 r_scangle_other 7.317 r_dihedral_angle_1_deg 6.548 r_scbond_it 4.717 r_scbond_other 4.715 r_mcangle_it 4.162 r_mcangle_other 4.162 r_mcbond_it 2.785 r_mcbond_other 2.779 r_angle_refined_deg 1.695 r_angle_other_deg 0.583 r_symmetry_nbd_other 0.376 r_nbd_refined 0.215 r_symmetry_xyhbond_nbd_refined 0.206 r_xyhbond_nbd_refined 0.178 r_nbd_other 0.174 r_nbtor_refined 0.168 r_symmetry_nbd_refined 0.16 r_symmetry_xyhbond_nbd_other 0.136 r_symmetry_nbtor_other 0.101 r_chiral_restr 0.077 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.003 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 306 Heterogen Atoms 16
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction