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Crystal Structure of FtsZ with F1294-0176
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-242 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.628 α = 90 b = 88.628 β = 90 c = 180.048 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-242 ftsz-242 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-242 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-242 2.096 44.314 100 0.348 0.365 0.107 0.993 6.4 11.7 46829
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-242 2.096 2.132 100 3.215 3.384 1.048 0.34 10.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.096 44.353 46808 2390 99.91 0.185 0.1833 0.1906 0.2229 0.2294 33.873
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.001 -0.001 0.003
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 14.898 r_dihedral_angle_3_deg 14.867 r_dihedral_angle_6_deg 14.382 r_lrange_it 8.588 r_lrange_other 8.499 r_scangle_it 6.955 r_scangle_other 6.954 r_dihedral_angle_1_deg 6.675 r_scbond_it 4.487 r_scbond_other 4.486
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 14.898 r_dihedral_angle_3_deg 14.867 r_dihedral_angle_6_deg 14.382 r_lrange_it 8.588 r_lrange_other 8.499 r_scangle_it 6.955 r_scangle_other 6.954 r_dihedral_angle_1_deg 6.675 r_scbond_it 4.487 r_scbond_other 4.486 r_mcangle_it 4.08 r_mcangle_other 4.08 r_mcbond_it 2.701 r_mcbond_other 2.699 r_angle_refined_deg 1.678 r_angle_other_deg 0.6 r_symmetry_nbd_other 0.548 r_symmetry_nbd_refined 0.276 r_symmetry_xyhbond_nbd_other 0.274 r_nbd_refined 0.218 r_nbd_other 0.216 r_xyhbond_nbd_refined 0.197 r_nbtor_refined 0.168 r_symmetry_xyhbond_nbd_refined 0.156 r_symmetry_nbtor_other 0.124 r_chiral_restr 0.075 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction