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Crystal Structure of FtsZ with F2683-0098
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-221 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.5 α = 90 b = 88.5 β = 90 c = 178.552 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-221 ftsz-221 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-221 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-221 2.104 44.25 100 0.284 0.295 0.08 0.992 7.2 13.4 45774
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-221 2.104 2.14 100 2.308 2.409 0.687 0.365 12.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.104 44.289 45770 2335 99.959 0.179 0.1766 0.1845 0.2164 0.2203 34.523
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.005 -0.002 -0.005 0.015
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.635 r_dihedral_angle_6_deg 14.369 r_dihedral_angle_2_deg 8.697 r_lrange_it 8.512 r_lrange_other 8.449 r_scangle_it 7.306 r_scangle_other 7.305 r_dihedral_angle_1_deg 6.514 r_scbond_it 4.689 r_scbond_other 4.688
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.635 r_dihedral_angle_6_deg 14.369 r_dihedral_angle_2_deg 8.697 r_lrange_it 8.512 r_lrange_other 8.449 r_scangle_it 7.306 r_scangle_other 7.305 r_dihedral_angle_1_deg 6.514 r_scbond_it 4.689 r_scbond_other 4.688 r_mcangle_other 4.27 r_mcangle_it 4.269 r_mcbond_it 2.846 r_mcbond_other 2.84 r_angle_refined_deg 1.681 r_angle_other_deg 0.632 r_symmetry_nbd_other 0.46 r_symmetry_xyhbond_nbd_refined 0.225 r_nbd_refined 0.218 r_xyhbond_nbd_refined 0.211 r_nbd_other 0.189 r_nbtor_refined 0.167 r_symmetry_nbd_refined 0.162 r_symmetry_nbtor_other 0.111 r_chiral_restr 0.078 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 311 Heterogen Atoms 17
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction