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Crystal Structure of FtsZ with F1641-0016
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-207 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.568 α = 90 b = 88.568 β = 90 c = 178.125 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-207 ftsz-207 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-207 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-207 2.087 44.284 100 0.282 0.293 0.08 0.995 8.4 13.4 46908
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-207 2.087 2.123 100 2.279 2.38 0.681 0.344 12.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.087 44.323 46900 2383 99.936 0.181 0.1788 0.1864 0.2157 0.2189 32.91
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.013 0.007 0.013 -0.043
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.139 r_dihedral_angle_6_deg 14.28 r_dihedral_angle_2_deg 8.814 r_lrange_it 8.532 r_lrange_other 8.458 r_scangle_it 7.13 r_scangle_other 7.129 r_dihedral_angle_1_deg 6.35 r_scbond_it 4.527 r_scbond_other 4.526
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.139 r_dihedral_angle_6_deg 14.28 r_dihedral_angle_2_deg 8.814 r_lrange_it 8.532 r_lrange_other 8.458 r_scangle_it 7.13 r_scangle_other 7.129 r_dihedral_angle_1_deg 6.35 r_scbond_it 4.527 r_scbond_other 4.526 r_mcangle_it 4.126 r_mcangle_other 4.126 r_mcbond_it 2.727 r_mcbond_other 2.726 r_angle_refined_deg 1.67 r_angle_other_deg 0.636 r_symmetry_nbd_other 0.524 r_symmetry_xyhbond_nbd_refined 0.235 r_nbd_refined 0.213 r_nbd_other 0.208 r_symmetry_nbd_refined 0.201 r_xyhbond_nbd_refined 0.194 r_nbtor_refined 0.167 r_symmetry_nbtor_other 0.119 r_chiral_restr 0.076 r_symmetry_xyhbond_nbd_other 0.044 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.005 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 312 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction