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Crystal Structure of FtsZ with F6666-3016
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-189 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.475 α = 90 b = 88.475 β = 90 c = 178.651 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-189 ftsz-189 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-189 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-189 1.804 44.237 100 0.153 0.159 0.043 0.999 12.5 13.4 72520
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-189 1.804 1.835 100 2.438 2.532 0.68 0.347 13.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.804 44.277 72513 3676 99.956 0.184 0.1826 0.1909 0.2143 0.2202 30.01
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.009 -0.005 -0.009 0.029
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 15.038 r_dihedral_angle_3_deg 14.275 r_lrange_it 8.47 r_lrange_other 8.44 r_dihedral_angle_2_deg 7.683 r_scangle_it 7.307 r_scangle_other 7.306 r_dihedral_angle_1_deg 6.619 r_scbond_it 4.768 r_scbond_other 4.767
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 15.038 r_dihedral_angle_3_deg 14.275 r_lrange_it 8.47 r_lrange_other 8.44 r_dihedral_angle_2_deg 7.683 r_scangle_it 7.307 r_scangle_other 7.306 r_dihedral_angle_1_deg 6.619 r_scbond_it 4.768 r_scbond_other 4.767 r_mcangle_other 4.046 r_mcangle_it 4.045 r_mcbond_it 2.836 r_mcbond_other 2.833 r_angle_refined_deg 1.737 r_angle_other_deg 0.609 r_symmetry_nbd_other 0.493 r_symmetry_xyhbond_nbd_refined 0.433 r_nbd_other 0.221 r_nbd_refined 0.22 r_xyhbond_nbd_refined 0.179 r_nbtor_refined 0.167 r_symmetry_nbd_refined 0.143 r_symmetry_nbtor_other 0.122 r_chiral_restr 0.083 r_symmetry_xyhbond_nbd_other 0.021 r_bond_refined_d 0.009 r_gen_planes_refined 0.008 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 314 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction