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Crystal Structure of FtsZ with F6300-0026
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-149 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.26
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.735 α = 90 b = 88.735 β = 90 c = 179.639 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-149 ftsz-149 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-149 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-149 2.147 43.073 100 0.301 0.313 0.086 0.995 6.6 13.4 43604
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-149 2.147 2.184 100 2.425 2.52 0.685 0.347 13.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.147 43.11 43592 2237 99.945 0.188 0.1858 0.1929 0.2253 0.2272 36.077
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.017 0.008 0.017 -0.055
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.554 r_dihedral_angle_6_deg 14.108 r_dihedral_angle_2_deg 9.372 r_lrange_it 8.56 r_lrange_other 8.494 r_scangle_it 6.886 r_scangle_other 6.885 r_dihedral_angle_1_deg 6.72 r_mcangle_it 4.488 r_mcangle_other 4.488
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.554 r_dihedral_angle_6_deg 14.108 r_dihedral_angle_2_deg 9.372 r_lrange_it 8.56 r_lrange_other 8.494 r_scangle_it 6.886 r_scangle_other 6.885 r_dihedral_angle_1_deg 6.72 r_mcangle_it 4.488 r_mcangle_other 4.488 r_scbond_it 4.474 r_scbond_other 4.474 r_mcbond_it 2.993 r_mcbond_other 2.991 r_angle_refined_deg 1.604 r_angle_other_deg 0.596 r_symmetry_nbd_other 0.51 r_symmetry_xyhbond_nbd_refined 0.226 r_symmetry_xyhbond_nbd_other 0.223 r_nbd_refined 0.22 r_nbd_other 0.208 r_xyhbond_nbd_refined 0.185 r_symmetry_nbd_refined 0.183 r_nbtor_refined 0.168 r_symmetry_nbtor_other 0.118 r_chiral_restr 0.075 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 310 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction