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Crystal Structure of FtsZ with F6616-2660
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-146 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.373 α = 90 b = 88.373 β = 90 c = 178.663 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-146 ftsz-146 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-146 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-146 1.953 44.187 100 0.209 0.217 0.059 0.997 9.6 13.3 57117
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-146 1.953 1.986 100 2.752 2.861 0.78 0.339 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.953 44.226 57105 2848 99.946 0.181 0.1789 0.1866 0.2125 0.2188 34.316
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.002 -0.001 -0.002 0.008
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.18 r_dihedral_angle_6_deg 14.208 r_lrange_it 8.961 r_lrange_other 8.918 r_dihedral_angle_2_deg 8.91 r_scangle_it 7.518 r_scangle_other 7.517 r_dihedral_angle_1_deg 6.722 r_scbond_it 4.89 r_scbond_other 4.889
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.18 r_dihedral_angle_6_deg 14.208 r_lrange_it 8.961 r_lrange_other 8.918 r_dihedral_angle_2_deg 8.91 r_scangle_it 7.518 r_scangle_other 7.517 r_dihedral_angle_1_deg 6.722 r_scbond_it 4.89 r_scbond_other 4.889 r_mcangle_it 4.281 r_mcangle_other 4.281 r_mcbond_it 2.922 r_mcbond_other 2.918 r_angle_refined_deg 1.735 r_angle_other_deg 0.651 r_symmetry_nbd_other 0.544 r_nbd_refined 0.216 r_symmetry_xyhbond_nbd_refined 0.216 r_xyhbond_nbd_refined 0.209 r_nbd_other 0.182 r_nbtor_refined 0.169 r_symmetry_nbd_refined 0.166 r_symmetry_xyhbond_nbd_other 0.155 r_symmetry_nbtor_other 0.127 r_chiral_restr 0.08 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 310 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction