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Crystal Structure of FtsZ with F3308-1098
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-145 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.62 53.06
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.729 α = 90 b = 88.729 β = 90 c = 178.884 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-145 ftsz-145 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-145 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-145 1.948 44.364 100 0.215 0.223 0.061 0.998 8 13.3 58059
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-145 1.948 1.982 100 2.346 2.439 0.664 0.339 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.948 44.404 58054 2921 99.967 0.182 0.1809 0.1887 0.2097 0.2156 33.6
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.003 -0.001 -0.003 0.009
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.92 r_dihedral_angle_6_deg 14.46 r_dihedral_angle_2_deg 9.443 r_lrange_it 8.485 r_lrange_other 8.469 r_scangle_it 7.301 r_scangle_other 7.3 r_dihedral_angle_1_deg 6.7 r_scbond_it 4.775 r_scbond_other 4.764
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.92 r_dihedral_angle_6_deg 14.46 r_dihedral_angle_2_deg 9.443 r_lrange_it 8.485 r_lrange_other 8.469 r_scangle_it 7.301 r_scangle_other 7.3 r_dihedral_angle_1_deg 6.7 r_scbond_it 4.775 r_scbond_other 4.764 r_mcangle_it 4.306 r_mcangle_other 4.305 r_mcbond_it 2.95 r_mcbond_other 2.949 r_angle_refined_deg 1.712 r_angle_other_deg 0.601 r_symmetry_nbd_other 0.494 r_symmetry_xyhbond_nbd_refined 0.264 r_symmetry_nbd_refined 0.222 r_nbd_refined 0.219 r_nbd_other 0.198 r_xyhbond_nbd_refined 0.192 r_nbtor_refined 0.168 r_symmetry_xyhbond_nbd_other 0.164 r_symmetry_nbtor_other 0.117 r_chiral_restr 0.079 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction