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Crystal Structure of FtsZ with F6608-1120
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-122 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.62 52.98
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.593 α = 90 b = 88.593 β = 90 c = 179.129 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-122 ftsz-122 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-122 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-122 2.103 43.001 100 0.26 0.27 0.074 0.997 7.5 13.4 46094
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-122 2.103 2.139 100 1.95 2.035 0.578 0.378 12.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.103 43.038 46043 2343 99.87 0.195 0.1933 0.1993 0.2317 0.2367 37.408
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.025 0.012 0.025 -0.08
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.998 r_dihedral_angle_6_deg 14.179 r_lrange_it 8.718 r_lrange_other 8.692 r_dihedral_angle_2_deg 7.15 r_scangle_it 6.98 r_scangle_other 6.979 r_dihedral_angle_1_deg 6.668 r_mcangle_other 4.722 r_mcangle_it 4.72
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.998 r_dihedral_angle_6_deg 14.179 r_lrange_it 8.718 r_lrange_other 8.692 r_dihedral_angle_2_deg 7.15 r_scangle_it 6.98 r_scangle_other 6.979 r_dihedral_angle_1_deg 6.668 r_mcangle_other 4.722 r_mcangle_it 4.72 r_scbond_it 4.527 r_scbond_other 4.527 r_mcbond_it 3.108 r_mcbond_other 3.108 r_angle_refined_deg 1.627 r_angle_other_deg 0.581 r_symmetry_nbd_other 0.462 r_symmetry_nbd_refined 0.293 r_symmetry_xyhbond_nbd_other 0.265 r_symmetry_xyhbond_nbd_refined 0.226 r_nbd_refined 0.225 r_nbd_other 0.223 r_xyhbond_nbd_other 0.204 r_xyhbond_nbd_refined 0.193 r_nbtor_refined 0.17 r_symmetry_nbtor_other 0.107 r_chiral_restr 0.076 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4215 Nucleic Acid Atoms Solvent Atoms 306 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction