AF_AFQ9HTI4F1

Computed structure model of HTH-type transcriptional regulator GbdR

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	HTH-type transcriptional regulator GbdR	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity	glycine betaine catabolic process catabolic process amino-acid betaine catabolic process modified amino acid metabolic process metabolic process cellular process modified amino acid catabolic process amino-acid betaine metabolic process regulation of biological process regulation of cellular process regulation of phosphatase activity regulation of catalytic activity positive regulation of dephosphorylation regulation of dephosphorylation glycine betaine catabolic process catabolic process amino-acid betaine catabolic process modified amino acid metabolic process metabolic process cellular process modified amino acid catabolic process amino-acid betaine metabolic process regulation of biological process regulation of cellular process regulation of phosphatase activity regulation of catalytic activity positive regulation of dephosphorylation regulation of dephosphorylation dephosphorylation biological regulation positive regulation of biological process positive regulation of catalytic activity positive regulation of phosphate metabolic process positive regulation of molecular function regulation of molecular function positive regulation of metabolic process positive regulation of hydrolase activity regulation of hydrolase activity phosphate-containing compound metabolic process positive regulation of phosphatase activity regulation of metabolic process positive regulation of cellular process amino acid metabolic process primary metabolic process positive regulation of amino acid metabolic process regulation of primary metabolic process regulation of amino acid metabolic process RNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of catabolic process positive regulation of catabolic process regulation of phospholipase activity positive regulation of phospholipase activity positive regulation of lipase activity	protein-containing complex protein-DNA complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR029062	Class I glutamine amidotransferase-like	Homologous Superfamily
A	IPR009057	Homeodomain-like superfamily	Homologous Superfamily
A	IPR018060	AraC-like, DNA binding HTH domain	Domain
A	IPR018062	HTH domain AraC-type, conserved site	Conserved Site
A	IPR052158	Isonitrile Hydratase/HTH-type transcriptional regulator	Family
A	IPR002818	DJ-1/PfpI-like	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.