AF_AFQ99715F6

Computed structure model of Collagen alpha-1(XII) chain

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Collagen alpha-1(XII) chain	structural molecule activity extracellular matrix structural constituent extracellular matrix structural constituent conferring tensile strength	cell adhesion cellular process developmental process multicellular organismal process formation of primary germ layer cellular developmental process embryonic morphogenesis tissue development embryo development gastrulation anatomical structure morphogenesis multicellular organism development endoderm development cell differentiation cell adhesion cellular process developmental process multicellular organismal process formation of primary germ layer cellular developmental process embryonic morphogenesis tissue development embryo development gastrulation anatomical structure morphogenesis multicellular organism development endoderm development cell differentiation anatomical structure development anatomical structure formation involved in morphogenesis endoderm formation endodermal cell differentiation cellular component organization collagen fibril organization extracellular matrix organization cellular component organization or biogenesis extracellular structure organization external encapsulating structure organization	membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle cellular anatomical structure organelle lumen organelle endoplasmic reticulum cytoplasm extracellular region membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle cellular anatomical structure organelle lumen organelle endoplasmic reticulum cytoplasm extracellular region extracellular exosome extracellular vesicle extracellular organelle vesicle extracellular membrane-bounded organelle solid phase of interstitial matrix protein-containing complex extracellular matrix collagen trimer collagen type XII trimer FACIT collagen complex external encapsulating structure complex of collagen trimers FACIT collagen trimer extracellular protein-containing complex supramolecular complex collagenous component of interstitial matrix interstitial matrix

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR008160	Collagen triple helix repeat	Repeat
A	IPR003961	Fibronectin type III	Domain
A	IPR036465	von Willebrand factor A-like domain superfamily	Homologous Superfamily
A	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	Homologous Superfamily
A	IPR050525	Extracellular Matrix Assembly and Organization	Family
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR002035	von Willebrand factor, type A	Domain
A	IPR048287	Thrombospondin-like, N-terminal domain	Domain
A	IPR036116	Fibronectin type III superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: Q99715	Bethlem myopathy Bethlem myopathy 2 Liver Cirrhosis, Experimental Ullrich congenital muscular dystrophy Ehlers-Danlos syndrome Ullrich congenital muscular dystrophy 2 malignant mesothelioma congenital muscular dystrophy malignant pancreatic neoplasm nasopharyngeal carcinoma ovarian cancer adrenal cortex carcinoma pituitary cancer astrocytic tumor breast carcinoma Bethlem myopathy Bethlem myopathy 2 Liver Cirrhosis, Experimental Ullrich congenital muscular dystrophy Ehlers-Danlos syndrome Ullrich congenital muscular dystrophy 2 malignant mesothelioma congenital muscular dystrophy malignant pancreatic neoplasm nasopharyngeal carcinoma ovarian cancer adrenal cortex carcinoma pituitary cancer astrocytic tumor breast carcinoma gastric carcinoma lung carcinoma medulloblastoma non-small cell lung carcinoma pancreatic ductal adenocarcinoma adrenoleukodystrophy transitional cell carcinoma atopic eczema breast fibroadenoma cystic fibrosis Emery-Dreifuss muscular dystrophy invasive ductal breast carcinoma myopathy osteosarcoma pilocytic astrocytoma arthrogryposis ulcerative colitis atypical teratoid rhabdoid tumor breast cancer Duchenne muscular dystrophy facioscapulohumeral muscular dystrophy

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.