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 9SE5 | pdb_00009se5

Mouse otoferlin (216-1931) in the lipid-free, Ca2+-bound state, "open" conformation (class 2)

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AIBRe9se5A1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: IBRECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF16165Ferlin C-terminus (Ferlin_C)Ferlin C-terminus- Family
PF22901Ferlin dsRNA-binding domain-like domain (dsrm_Ferlin)Ferlin dsRNA-binding domain-like domainThis entry represents a domain which structurally resembles double stranded RNA binding domains found in ferlin proteins [1]. Domain
PF08150FerB (NUC096) domain (FerB)FerB (NUC096) domainThis is central domain B in proteins of the Ferlin family [1]. Domain
PF08151FerI (NUC094) domain (FerI)FerI (NUC094) domainThis domain is present in proteins of the Ferlin family. It is often located between two C2 domains [1]. Domain
PF00168C2 domain (C2)C2 domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Otoferlin- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR037723Ferlin, fourth C2 domainDomain
IPR012561Ferlin B-domainDomain
IPR037721Ferlin familyFamily
IPR037724Ferlin, fifth C2 domainDomain
IPR037725Ferlin, sixth C2 domainDomain
IPR037722Ferlin, third C2 domainDomain
IPR032362Ferlin, C-terminal domainDomain
IPR012968FerIin domainDomain
IPR000008C2 domainDomain
IPR035892C2 domain superfamilyHomologous Superfamily
IPR037726Ferlin, first C2 domainDomain
IPR055072Ferlin, dsRNA-binding domain-like domainDomain
IPR037720Ferlin, second C2 domainDomain