Annotations: 9QDI

Crystal structure of BF3526 peptidase from Bacteroides fragilis in complex with a peptide

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I, J, K, L	Synthetic peptide SER-THR-PRO-PRO	-	-	-
A, B, C, D, E A, B, C, D, E, F, G, H	Lipoprotein	peptidase activity catalytic activity, acting on a protein metallopeptidase activity hydrolase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR038171	Peptidase M64, N-terminal domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR024079	Metallopeptidase, catalytic domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR032625	Peptidase M64, N-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR019026	Peptidase M64, IgA	Family

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9QDI | pdb_00009qdi

Crystal structure of BF3526 peptidase from Bacteroides fragilis in complex with a peptide

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage