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 9O01 | pdb_00009o01

Crystal structure of AfOgg1-D140N mutant bound to 8-OG DNA duplex in an intermediate state

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF221758-oxoguanine DNA glycosylase (Ogg-HhH)8-oxoguanine DNA glycosylaseThis entry represents 8-oxoguanine DNA glycosylases (Ogg) that are responsible for the recognition and excision of one of the most common DNA oxidative product, 7,8-dihydro-8-oxoguanine (8-oxoG). These enzymes share a common all-alpha architecture bu ...This entry represents 8-oxoguanine DNA glycosylases (Ogg) that are responsible for the recognition and excision of one of the most common DNA oxidative product, 7,8-dihydro-8-oxoguanine (8-oxoG). These enzymes share a common all-alpha architecture build around a central HhH motif [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3')---
DNA (5'-D(P*GP*CP*GP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*CP*T)-3')---
8-oxoguanine DNA glycosylase/AP lyase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR0120928-oxoguanine DNA glycosylase/AP lyase OggFamily
IPR003265HhH-GPD domainDomain
IPR023170Helix-hairpin-helix, base-excision DNA repair, C-terminalHomologous Superfamily
IPR011257DNA glycosylaseHomologous Superfamily