9MOF | pdb_00009mof

Structure of the bacteriophage T4 portal-neck-tail connector complex

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], C [auth 2], CC [auth B7], CE [auth Bz], D [auth 3], E [auth 4], F [auth 5], FA [auth AK], GA [auth AL], HA [auth AM], IA [auth AN], JA [auth AO], KA [auth AP], SD [auth Bp], TD [auth Bq], UD [auth Br], VD [auth Bs], WB [auth B1], WD [auth Bt], XB [auth B2], XD [auth Bu], Y [auth AD], YB [auth B3], YD [auth Bv], ZB [auth B4], ZD [auth Bw]	PF07068	Major capsid protein Gp23 (Gp23)	Major capsid protein Gp23	-	Family
AA [auth AF], AD [auth BX], BA [auth AG], BD [auth BY], CA [auth AH], AA [auth AF], AD [auth BX], BA [auth AG], BD [auth BY], CA [auth AH], CD [auth BZ], DA [auth AI], DD [auth Ba], EA [auth AJ], ED [auth Bb], FD [auth Bc], G [auth 6], GD [auth Bd], H [auth 7], HD [auth Be], I [auth 8], ID [auth Bf], J [auth 9], JD [auth Bg], KD [auth Bh], LD [auth Bi], MD [auth Bj], ND [auth Bk], OD [auth Bl], PD [auth Bm], PF [auth o], QD [auth Bn], RD [auth Bo], V [auth AA], Z [auth AE]	PF07068	Major capsid protein Gp23 (Gp23)	Major capsid protein Gp23	-	Family
AB [auth Af], BB [auth Ag], CB [auth Ah], DB [auth Ai], EB [auth Aj], AB [auth Af], BB [auth Ag], CB [auth Ah], DB [auth Ai], EB [auth Aj], FB [auth Ak], HB [auth Am], IB [auth An], JB [auth Ao], KB [auth Ap], LC [auth BI], MC [auth BJ], NC [auth BK], P [auth A4], PB [auth Au], PC [auth BM], Q [auth A5], QA [auth AV], RA [auth AW], RB [auth Aw], S [auth A7], SA [auth AX], T [auth A8], TB [auth Ay], U [auth A9], UA [auth AZ], UB [auth Az], XA [auth Ac], YA [auth Ad], ZA [auth Ae]	PF07068	Major capsid protein Gp23 (Gp23)	Major capsid protein Gp23	-	Family
FC [auth BC], GB [auth Al], HC [auth BE], LB [auth Aq], MB [auth Ar], FC [auth BC], GB [auth Al], HC [auth BE], LB [auth Aq], MB [auth Ar], NB [auth As], OB [auth At], OC [auth BL], R [auth A6], TA [auth AY], VA [auth Aa], WA [auth Ab]	PF07068	Major capsid protein Gp23 (Gp23)	Major capsid protein Gp23	-	Family
AG [auth z], WF [auth v], X [auth AC], XF [auth w], YF [auth x], AG [auth z], WF [auth v], X [auth AC], XF [auth w], YF [auth x], ZF [auth y]	PF07068	Major capsid protein Gp23 (Gp23)	Major capsid protein Gp23	-	Family
LA [auth AQ], MA [auth AR], NA [auth AS], OA [auth AT], PA [auth AU]	PF07068	Major capsid protein Gp23 (Gp23)	Major capsid protein Gp23	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 0], LF [auth k], MF [auth l], NF [auth m], OF [auth n], A [auth 0], LF [auth k], MF [auth l], NF [auth m], OF [auth n], QF [auth p]	gp14, neck protein	-	-	virion component
AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], C [auth 2], CC [auth B7], CE [auth Bz], D [auth 3], E [auth 4], F [auth 5], FA [auth AK], GA [auth AL], HA [auth AM], IA [auth AN], JA [auth AO], KA [auth AP], SD [auth Bp], TD [auth Bq], UD [auth Br], VD [auth Bs], WB [auth B1], WD [auth Bt], XB [auth B2], XD [auth Bu], Y [auth AD], YB [auth B3], YD [auth Bv], ZB [auth B4], ZD [auth Bw]	gp18, tail sheath protein	-	symbiont genome ejection through host cell envelope biological process involved in interspecies interaction between organisms symbiont entry into host cell viral process symbiont entry into host viral life cycle symbiont genome ejection through host cell envelope, contractile tail mechanism biological process involved in interaction with host biological process involved in symbiotic interaction	virus tail virion component virus tail, sheath
AA [auth AF], AD [auth BX], BA [auth AG], BD [auth BY], CA [auth AH], AA [auth AF], AD [auth BX], BA [auth AG], BD [auth BY], CA [auth AH], CD [auth BZ], DA [auth AI], DD [auth Ba], EA [auth AJ], ED [auth Bb], FD [auth Bc], G [auth 6], GD [auth Bd], H [auth 7], HD [auth Be], I [auth 8], ID [auth Bf], J [auth 9], JD [auth Bg], KD [auth Bh], LD [auth Bi], MD [auth Bj], ND [auth Bk], OD [auth Bl], PD [auth Bm], PF [auth o], QD [auth Bn], RD [auth Bo], V [auth AA], Z [auth AE]	gp19, tail tube protein	structural molecule activity	-	-
AF [auth Z], BF [auth a], CF [auth b], DE [auth C], DF [auth c], AF [auth Z], BF [auth a], CF [auth b], DE [auth C], DF [auth c], EE [auth D], EF [auth d], FE [auth E], FF [auth e], GE [auth F], GF [auth f], HE [auth G], HF [auth g], IE [auth H], IF [auth h], JE [auth I], JF [auth i], K [auth A], KE [auth J], KF [auth j], LE [auth K], ME [auth L], NE [auth M], OE [auth N], PE [auth O], QE [auth P], RE [auth Q], SE [auth R], TE [auth S], UE [auth T], VB [auth B], VE [auth U], WE [auth V], XE [auth W], YE [auth X], ZE [auth Y]	gpwac, fibritin	-	-	virion component
DC [auth BA], EC [auth BB], GC [auth BD], IC [auth BF], JC [auth BG], DC [auth BA], EC [auth BB], GC [auth BD], IC [auth BF], JC [auth BG], KC [auth BH], L [auth A0], M [auth A1], N [auth A2], O [auth A3], QB [auth Av], SB [auth Ax]	gp20, portal protein	-	symbiont genome ejection through host cell envelope biological process involved in interspecies interaction between organisms symbiont entry into host cell viral process symbiont entry into host viral life cycle symbiont genome ejection through host cell envelope, contractile tail mechanism biological process involved in interaction with host biological process involved in symbiotic interaction exit from host cell viral release from host cell virion assembly viral genome packaging	viral capsid virion component
AB [auth Af], BB [auth Ag], CB [auth Ah], DB [auth Ai], EB [auth Aj], AB [auth Af], BB [auth Ag], CB [auth Ah], DB [auth Ai], EB [auth Aj], FB [auth Ak], HB [auth Am], IB [auth An], JB [auth Ao], KB [auth Ap], LC [auth BI], MC [auth BJ], NC [auth BK], P [auth A4], PB [auth Au], PC [auth BM], Q [auth A5], QA [auth AV], RA [auth AW], RB [auth Aw], S [auth A7], SA [auth AX], T [auth A8], TB [auth Ay], U [auth A9], UA [auth AZ], UB [auth Az], XA [auth Ac], YA [auth Ad], ZA [auth Ae]	gp23, major capsid protein	-	-	viral capsid virion component icosahedral viral capsid T=13 icosahedral viral capsid
FC [auth BC], GB [auth Al], HC [auth BE], LB [auth Aq], MB [auth Ar], FC [auth BC], GB [auth Al], HC [auth BE], LB [auth Aq], MB [auth Ar], NB [auth As], OB [auth At], OC [auth BL], R [auth A6], TA [auth AY], VA [auth Aa], WA [auth Ab]	gp13, neck protein	-	-	virion component
AG [auth z], WF [auth v], X [auth AC], XF [auth w], YF [auth x], AG [auth z], WF [auth v], X [auth AC], XF [auth w], YF [auth x], ZF [auth y]	gp3, tube terminator protein	structural molecule activity	-	-
QC [auth BN], RC [auth BO], SC [auth BP], TC [auth BQ], UC [auth BR], QC [auth BN], RC [auth BO], SC [auth BP], TC [auth BQ], UC [auth BR], VC [auth BS], WC [auth BT], XC [auth BU], YC [auth BV], ZC [auth BW]	Soc, small outer capsid protein	-	-	viral capsid virion component viral capsid, decoration
RF [auth q], SF [auth r], TF [auth s], UF [auth t], VF [auth u], RF [auth q], SF [auth r], TF [auth s], UF [auth t], VF [auth u], W [auth AB]	gp15, tail terminator protein	-	-	-
LA [auth AQ], MA [auth AR], NA [auth AS], OA [auth AT], PA [auth AU]	Hoc, highly immunogenic outer capsid protein	-	-	viral capsid virion component viral capsid, decoration

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 0], LF [auth k], MF [auth l], NF [auth m], OF [auth n], A [auth 0], LF [auth k], MF [auth l], NF [auth m], OF [auth n], QF [auth p]	IPR021674	Bacteriophage T4, Gp14, neck protein	Family
AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], C [auth 2], CC [auth B7], CE [auth Bz], D [auth 3], E [auth 4], F [auth 5], FA [auth AK], GA [auth AL], HA [auth AM], IA [auth AN], JA [auth AO], KA [auth AP], SD [auth Bp], TD [auth Bq], UD [auth Br], VD [auth Bs], WB [auth B1], WD [auth Bt], XB [auth B2], XD [auth Bu], Y [auth AD], YB [auth B3], YD [auth Bv], ZB [auth B4], ZD [auth Bw]	IPR052042	Tail sheath structural protein	Family
AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], C [auth 2], CC [auth B7], CE [auth Bz], D [auth 3], E [auth 4], F [auth 5], FA [auth AK], GA [auth AL], HA [auth AM], IA [auth AN], JA [auth AO], KA [auth AP], SD [auth Bp], TD [auth Bq], UD [auth Br], VD [auth Bs], WB [auth B1], WD [auth Bt], XB [auth B2], XD [auth Bu], Y [auth AD], YB [auth B3], YD [auth Bv], ZB [auth B4], ZD [auth Bw]	IPR054565	Tail sheath protein Gp18-like, domain I	Domain
AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], C [auth 2], CC [auth B7], CE [auth Bz], D [auth 3], E [auth 4], F [auth 5], FA [auth AK], GA [auth AL], HA [auth AM], IA [auth AN], JA [auth AO], KA [auth AP], SD [auth Bp], TD [auth Bq], UD [auth Br], VD [auth Bs], WB [auth B1], WD [auth Bt], XB [auth B2], XD [auth Bu], Y [auth AD], YB [auth B3], YD [auth Bv], ZB [auth B4], ZD [auth Bw]	IPR020287	Tail sheath protein, C-terminal domain	Domain
AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], C [auth 2], CC [auth B7], CE [auth Bz], D [auth 3], E [auth 4], F [auth 5], FA [auth AK], GA [auth AL], HA [auth AM], IA [auth AN], JA [auth AO], KA [auth AP], SD [auth Bp], TD [auth Bq], UD [auth Br], VD [auth Bs], WB [auth B1], WD [auth Bt], XB [auth B2], XD [auth Bu], Y [auth AD], YB [auth B3], YD [auth Bv], ZB [auth B4], ZD [auth Bw]	IPR054564	Tail sheath protein Gp18-like, domain III N-terminal region	Domain
AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], C [auth 2], CC [auth B7], CE [auth Bz], D [auth 3], E [auth 4], F [auth 5], FA [auth AK], GA [auth AL], HA [auth AM], IA [auth AN], JA [auth AO], KA [auth AP], SD [auth Bp], TD [auth Bq], UD [auth Br], VD [auth Bs], WB [auth B1], WD [auth Bt], XB [auth B2], XD [auth Bu], Y [auth AD], YB [auth B3], YD [auth Bv], ZB [auth B4], ZD [auth Bw]	IPR035089	Tail sheath protein, subtilisin-like domain	Domain
AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], AC [auth B5], AE [auth Bx], B [auth 1], BC [auth B6], BE [auth By], C [auth 2], CC [auth B7], CE [auth Bz], D [auth 3], E [auth 4], F [auth 5], FA [auth AK], GA [auth AL], HA [auth AM], IA [auth AN], JA [auth AO], KA [auth AP], SD [auth Bp], TD [auth Bq], UD [auth Br], VD [auth Bs], WB [auth B1], WD [auth Bt], XB [auth B2], XD [auth Bu], Y [auth AD], YB [auth B3], YD [auth Bv], ZB [auth B4], ZD [auth Bw]	IPR035326	Phage tail sheath protein-like, beta-sandwich domain	Domain
AA [auth AF], AD [auth BX], BA [auth AG], BD [auth BY], CA [auth AH], AA [auth AF], AD [auth BX], BA [auth AG], BD [auth BY], CA [auth AH], CD [auth BZ], DA [auth AI], DD [auth Ba], EA [auth AJ], ED [auth Bb], FD [auth Bc], G [auth 6], GD [auth Bd], H [auth 7], HD [auth Be], I [auth 8], ID [auth Bf], J [auth 9], JD [auth Bg], KD [auth Bh], LD [auth Bi], MD [auth Bj], ND [auth Bk], OD [auth Bl], PD [auth Bm], PF [auth o], QD [auth Bn], RD [auth Bo], V [auth AA], Z [auth AE]	IPR010667	Bacteriophage T4, Gp19, tail tube	Family
AF [auth Z], BF [auth a], CF [auth b], DE [auth C], DF [auth c], AF [auth Z], BF [auth a], CF [auth b], DE [auth C], DF [auth c], EE [auth D], EF [auth d], FE [auth E], FF [auth e], GE [auth F], GF [auth f], HE [auth G], HF [auth g], IE [auth H], IF [auth h], JE [auth I], JF [auth i], K [auth A], KE [auth J], KF [auth j], LE [auth K], ME [auth L], NE [auth M], OE [auth N], PE [auth O], QE [auth P], RE [auth Q], SE [auth R], TE [auth S], UE [auth T], VB [auth B], VE [auth U], WE [auth V], XE [auth W], YE [auth X], ZE [auth Y]	IPR012473	Fibritin C-terminal	Domain
DC [auth BA], EC [auth BB], GC [auth BD], IC [auth BF], JC [auth BG], DC [auth BA], EC [auth BB], GC [auth BD], IC [auth BF], JC [auth BG], KC [auth BH], L [auth A0], M [auth A1], N [auth A2], O [auth A3], QB [auth Av], SB [auth Ax]	IPR010823	Portal protein Gp20	Family
AB [auth Af], BB [auth Ag], CB [auth Ah], DB [auth Ai], EB [auth Aj], AB [auth Af], BB [auth Ag], CB [auth Ah], DB [auth Ai], EB [auth Aj], FB [auth Ak], HB [auth Am], IB [auth An], JB [auth Ao], KB [auth Ap], LC [auth BI], MC [auth BJ], NC [auth BK], P [auth A4], PB [auth Au], PC [auth BM], Q [auth A5], QA [auth AV], RA [auth AW], RB [auth Aw], S [auth A7], SA [auth AX], T [auth A8], TB [auth Ay], U [auth A9], UA [auth AZ], UB [auth Az], XA [auth Ac], YA [auth Ad], ZA [auth Ae]	IPR010762	Capsid protein, T4-like bacteriophage-like	Family
AB [auth Af], BB [auth Ag], CB [auth Ah], DB [auth Ai], EB [auth Aj], AB [auth Af], BB [auth Ag], CB [auth Ah], DB [auth Ai], EB [auth Aj], FB [auth Ak], HB [auth Am], IB [auth An], JB [auth Ao], KB [auth Ap], LC [auth BI], MC [auth BJ], NC [auth BK], P [auth A4], PB [auth Au], PC [auth BM], Q [auth A5], QA [auth AV], RA [auth AW], RB [auth Aw], S [auth A7], SA [auth AX], T [auth A8], TB [auth Ay], U [auth A9], UA [auth AZ], UB [auth Az], XA [auth Ac], YA [auth Ad], ZA [auth Ae]	IPR038997	Major capsid protein, Myoviridae	Family
AG [auth z], WF [auth v], X [auth AC], XF [auth w], YF [auth x], AG [auth z], WF [auth v], X [auth AC], XF [auth w], YF [auth x], ZF [auth y]	IPR010667	Bacteriophage T4, Gp19, tail tube	Family
QC [auth BN], RC [auth BO], SC [auth BP], TC [auth BQ], UC [auth BR], QC [auth BN], RC [auth BO], SC [auth BP], TC [auth BQ], UC [auth BR], VC [auth BS], WC [auth BT], XC [auth BU], YC [auth BV], ZC [auth BW]	IPR038151	Small outer capsid protein superfamily	Homologous Superfamily
QC [auth BN], RC [auth BO], SC [auth BP], TC [auth BQ], UC [auth BR], QC [auth BN], RC [auth BO], SC [auth BP], TC [auth BQ], UC [auth BR], VC [auth BS], WC [auth BT], XC [auth BU], YC [auth BV], ZC [auth BW]	IPR031743	Small outer capsid protein	Family
RF [auth q], SF [auth r], TF [auth s], UF [auth t], VF [auth u], RF [auth q], SF [auth r], TF [auth s], UF [auth t], VF [auth u], W [auth AB]	IPR031997	Myoviridae tail sheath stabiliser	Family
RF [auth q], SF [auth r], TF [auth s], UF [auth t], VF [auth u], RF [auth q], SF [auth r], TF [auth s], UF [auth t], VF [auth u], W [auth AB]	IPR038553	Myoviridae tail sheath stabiliser superfamily	Homologous Superfamily
LA [auth AQ], MA [auth AR], NA [auth AS], OA [auth AT], PA [auth AU]	IPR038998	Highly immunogenic outer capsid protein	Family
LA [auth AQ], MA [auth AR], NA [auth AS], OA [auth AT], PA [auth AU]	IPR035986	PKD domain superfamily	Homologous Superfamily
LA [auth AQ], MA [auth AR], NA [auth AS], OA [auth AT], PA [auth AU]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
LA [auth AQ], MA [auth AR], NA [auth AS], OA [auth AT], PA [auth AU]	IPR022409	PKD/Chitinase domain	Domain
LA [auth AQ], MA [auth AR], NA [auth AS], OA [auth AT], PA [auth AU]	IPR000601	PKD domain	Domain
LA [auth AQ], MA [auth AR], NA [auth AS], OA [auth AT], PA [auth AU]	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
LA [auth AQ], MA [auth AR], NA [auth AS], OA [auth AT], PA [auth AU]	IPR007110	Immunoglobulin-like domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.