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 9MOF | pdb_00009mof

Structure of the bacteriophage T4 portal-neck-tail connector complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Z [auth AE]Beta-Caspe9mofAE1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
V [auth AA]Beta-Caspe9mofAA1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
RD [auth Bo]Beta-Caspe9mofBo1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
QD [auth Bn]Beta-Caspe9mofBn1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
PF [auth o]Beta-Caspe9mofo1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
PD [auth Bm]Beta-Caspe9mofBm1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
OD [auth Bl]Beta-Caspe9mofBl1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
ND [auth Bk]Beta-Caspe9mofBk1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
MD [auth Bj]Beta-Caspe9mofBj1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
LD [auth Bi]Beta-Caspe9mofBi1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
KD [auth Bh]Beta-Caspe9mofBh1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
JD [auth Bg]Beta-Caspe9mofBg1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
J [auth 9]Beta-Caspe9mof91 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
ID [auth Bf]Beta-Caspe9mofBf1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
I [auth 8]Beta-Caspe9mof81 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
HD [auth Be]Beta-Caspe9mofBe1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
H [auth 7]Beta-Caspe9mof71 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
GD [auth Bd]Beta-Caspe9mofBd1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
G [auth 6]Ion_trans_2e9mof61 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Ion_trans_2ECOD (v295.2)
FD [auth Bc]Beta-Caspe9mofBc1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
ED [auth Bb]Beta-Caspe9mofBb1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
EA [auth AJ]Beta-Caspe9mofAJ1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
DD [auth Ba]Beta-Caspe9mofBa1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
DA [auth AI]Beta-Caspe9mofAI1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
CD [auth BZ]Beta-Caspe9mofBZ1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
CA [auth AH]Beta-Caspe9mofAH1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
BD [auth BY]Beta-Caspe9mofBY1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
BA [auth AG]Beta-Caspe9mofAG1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
AD [auth BX]Beta-Caspe9mofBX1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
AA [auth AF]Beta-Caspe9mofAF1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
SB [auth Ax]Beta-Caspe9mofAx1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
QB [auth Av]Beta-Caspe9mofAv1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
O [auth A3]Beta-Caspe9mofA31 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
N [auth A2]Beta-Caspe9mofA21 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
M [auth A1]Beta-Caspe9mofA11 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
L [auth A0]Beta-Caspe9mofA01 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
KC [auth BH]Beta-Caspe9mofBH1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
JC [auth BG]Beta-Caspe9mofBG1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
IC [auth BF]Beta-Caspe9mofBF1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
GC [auth BD]Beta-Caspe9mofBD1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
EC [auth BB]Beta-Caspe9mofBB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
DC [auth BA]Beta-Caspe9mofBA1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
ZA [auth Ae]Beta-Caspe9mofAe1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
YA [auth Ad]Beta-Caspe9mofAd1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
XA [auth Ac]Beta-Caspe9mofAc1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
UB [auth Az]Beta-Caspe9mofAz1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
UA [auth AZ]Beta-Caspe9mofAZ1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
U [auth A9]Beta-Caspe9mofA91 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
TB [auth Ay]Beta-Caspe9mofAy1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
T [auth A8]Beta-Caspe9mofA81 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
SA [auth AX]Beta-Caspe9mofAX1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
S [auth A7]Beta-Caspe9mofA71 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
RB [auth Aw]Beta-Caspe9mofAw1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
RA [auth AW]Beta-Caspe9mofAW1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
QA [auth AV]Beta-Caspe9mofAV1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
Q [auth A5]Beta-Caspe9mofA51 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
PC [auth BM]Beta-Caspe9mofBM1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
PB [auth Au]Beta-Caspe9mofAu1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
P [auth A4]Beta-Caspe9mofA41 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
NC [auth BK]Beta-Caspe9mofBK1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
MC [auth BJ]Beta-Caspe9mofBJ1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
LC [auth BI]Beta-Caspe9mofBI1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
KB [auth Ap]Beta-Caspe9mofAp1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
JB [auth Ao]Ion_trans_2e9mofAo1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Ion_trans_2ECOD (v295.2)
IB [auth An]Beta-Caspe9mofAn1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
HB [auth Am]Beta-Caspe9mofAm1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
FB [auth Ak]Beta-Caspe9mofAk1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
EB [auth Aj]Beta-Caspe9mofAj1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
DB [auth Ai]Beta-Caspe9mofAi1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
CB [auth Ah]Beta-Caspe9mofAh1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
BB [auth Ag]Beta-Caspe9mofAg1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
AB [auth Af]Beta-Caspe9mofAf1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
QC [auth BN]Ion_trans_2e9mofBN1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Ion_trans_2ECOD (v295.2)
W [auth AB]Beta-Caspe9mofAB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
VF [auth u]Beta-Caspe9mofu1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
UF [auth t]Beta-Caspe9moft1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
TF [auth s]Beta-Caspe9mofs1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
SF [auth r]Beta-Caspe9mofr1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
RF [auth q]Beta-Caspe9mofq1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Beta-CaspECOD (v295.2)
FA [auth AK]Ion_trans_2e9mofAK1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Ion_trans_2ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07068Major capsid protein Gp23 (Gp23)Major capsid protein Gp23- Family
PF07068Major capsid protein Gp23 (Gp23)Major capsid protein Gp23- Family
LA [auth AQ],
MA [auth AR],
NA [auth AS],
OA [auth AT],
PA [auth AU]
PF07068Major capsid protein Gp23 (Gp23)Major capsid protein Gp23- Family
PF07068Major capsid protein Gp23 (Gp23)Major capsid protein Gp23- Family
PF07068Major capsid protein Gp23 (Gp23)Major capsid protein Gp23- Family
PF07068Major capsid protein Gp23 (Gp23)Major capsid protein Gp23- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
gp19, tail tube protein - -
gpwac, fibritin- - -
gp20, portal protein-
gp23, major capsid protein- -
LA [auth AQ],
MA [auth AR],
NA [auth AS],
OA [auth AT],
PA [auth AU]
Hoc, highly immunogenic outer capsid protein- -
Soc, small outer capsid protein- -
gp3, tube terminator protein - -
gp15, tail terminator protein- - -
gp13, neck protein- - -
gp18, tail sheath protein-
gp14, neck protein- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR010667Bacteriophage T4, Gp19, tail tubeFamily
IPR012473Fibritin C-terminalDomain
IPR010823Portal protein Gp20Family
IPR010762Capsid protein, T4-like bacteriophage-likeFamily
IPR038997Major capsid protein, MyoviridaeFamily
LA [auth AQ],
MA [auth AR],
NA [auth AS],
OA [auth AT],
PA [auth AU]
IPR038998Highly immunogenic outer capsid proteinFamily
LA [auth AQ],
MA [auth AR],
NA [auth AS],
OA [auth AT],
PA [auth AU]
IPR035986PKD domain superfamilyHomologous Superfamily
LA [auth AQ],
MA [auth AR],
NA [auth AS],
OA [auth AT],
PA [auth AU]
IPR013783Immunoglobulin-like foldHomologous Superfamily
LA [auth AQ],
MA [auth AR],
NA [auth AS],
OA [auth AT],
PA [auth AU]
IPR022409PKD/Chitinase domainDomain
LA [auth AQ],
MA [auth AR],
NA [auth AS],
OA [auth AT],
PA [auth AU]
IPR000601PKD domainDomain
LA [auth AQ],
MA [auth AR],
NA [auth AS],
OA [auth AT],
PA [auth AU]
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
LA [auth AQ],
MA [auth AR],
NA [auth AS],
OA [auth AT],
PA [auth AU]
IPR007110Immunoglobulin-like domainDomain
IPR038151Small outer capsid protein superfamilyHomologous Superfamily
IPR031743Small outer capsid proteinFamily
IPR010667Bacteriophage T4, Gp19, tail tubeFamily
IPR031997Myoviridae tail sheath stabiliserFamily
IPR038553Myoviridae tail sheath stabiliser superfamilyHomologous Superfamily
IPR059555Bacteriophage T4 neck protein gp13Family
IPR052042Tail sheath structural proteinFamily
IPR054565Tail sheath protein Gp18-like, domain IDomain
IPR020287Tail sheath protein, C-terminal domainDomain
IPR054564Tail sheath protein Gp18-like, domain III N-terminal regionDomain
IPR035089Tail sheath protein, subtilisin-like domainDomain
IPR035326Phage tail sheath protein-like, beta-sandwich domainDomain
IPR021674Bacteriophage T4, Gp14, neck proteinFamily