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 9ZCS | pdb_00009zcs

Crystal structure of HOPS subunits Vps33 and Vps16 in complex with the Nyv1 and Vam3 SNARE motifs

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00995Sec1 family (Sec1)Sec1 family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
SNAP receptor-like protein
Nyv1 SNARE motif-
Vacuolar protein sorting-associated protein 16
Small conjugating protein ligase-like protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR006012Syntaxin/epimorphin, conserved siteConserved Site
IPR000727Target SNARE coiled-coil homology domainDomain
IPR010989SNAREHomologous Superfamily
IPR006011Syntaxin, N-terminal domainDomain
IPR045242SyntaxinFamily
IPR010908Longin domainDomain
IPR001388Synaptobrevin-likeFamily
IPR042855v-SNARE, coiled-coil homology domainDomain
IPR051097Synaptobrevin-like vesicular transport proteinFamily
IPR011012Longin-like domain superfamilyHomologous Superfamily
IPR016534Vacuolar protein sorting-associated protein 16Family
IPR006925Vps16, C-terminalDomain
IPR038132Vps16, C-terminal domain superfamilyHomologous Superfamily
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR006926Vps16, N-terminalDomain
IPR027482Sec1-like, domain 2Homologous Superfamily
IPR043127Sec1-like, domain 3aHomologous Superfamily
IPR016135Ubiquitin-conjugating enzyme/RWD-likeHomologous Superfamily
IPR001619Sec1-like proteinFamily
IPR043155Vacuolar protein sorting-associated protein 33, domain 3bHomologous Superfamily
IPR000608Ubiquitin-conjugating (UBC), catalytic core domainDomain
IPR043154Sec1-like, domain 1Homologous Superfamily
IPR036045Sec1-like superfamilyHomologous Superfamily