9XFJ | pdb_00009xfj

Cryo-EM structure of the Bavachalcone bound GPR120-Giq complex (local refinement)

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(q) subunit alpha	enzyme regulator activity adenylate cyclase inhibitor activity cyclase regulator activity molecular function inhibitor activity cyclase inhibitor activity molecular function regulator activity enzyme inhibitor activity adenylate cyclase regulator activity protein-containing complex binding binding G-protein beta/gamma-subunit complex binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity enzyme regulator activity adenylate cyclase inhibitor activity cyclase regulator activity molecular function inhibitor activity cyclase inhibitor activity molecular function regulator activity enzyme inhibitor activity adenylate cyclase regulator activity protein-containing complex binding binding G-protein beta/gamma-subunit complex binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity D2 dopamine receptor binding protein binding signaling receptor binding G protein-coupled receptor binding dopamine receptor binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding magnesium ion binding metal ion binding GDP binding G protein-coupled serotonin receptor binding G protein activity GTPase regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity	cellular process cell division leukocyte migration immune system process mononuclear cell migration lymphocyte migration cell migration T cell migration cell motility multicellular organismal process system process regulation of biological process relaxation of smooth muscle regulation of system process cellular process cell division leukocyte migration immune system process mononuclear cell migration lymphocyte migration cell migration T cell migration cell motility multicellular organismal process system process regulation of biological process relaxation of smooth muscle regulation of system process biological regulation positive regulation of biological process regulation of muscle system process muscle system process relaxation of muscle positive regulation of relaxation of smooth muscle positive regulation of relaxation of muscle positive regulation of multicellular organismal process regulation of multicellular organismal process regulation of relaxation of smooth muscle regulation of relaxation of muscle establishment of organelle localization cellular localization microtubule cytoskeleton organization spindle localization establishment or maintenance of cell polarity mitotic cell cycle cellular component organization localization establishment of mitotic spindle localization establishment of spindle localization establishment of spindle orientation organelle localization establishment of localization in cell cell cycle cellular component organization or biogenesis microtubule cytoskeleton organization involved in mitosis cell cycle process establishment of localization establishment of cell polarity organelle organization mitotic cell cycle process establishment of mitotic spindle orientation microtubule-based process cytoskeleton organization regulation of behavior behavior regulation of eating behavior eating behavior feeding behavior regulation of feeding behavior cellular response to stimulus regulation of signaling regulation of cellular process response to stimulus signaling regulation of signal transduction cell communication regulation of response to stimulus regulation of cell communication G protein-coupled receptor signaling pathway signal transduction regulation of G protein-coupled receptor signaling pathway neuropeptide signaling pathway adenylate cyclase-inhibiting serotonin receptor signaling pathway G protein-coupled serotonin receptor signaling pathway adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway adenylate cyclase-modulating G protein-coupled receptor signaling pathway response to hormone response to chemical response to endogenous stimulus response to peptide hormone response to oxygen-containing compound response to nitrogen compound regulation of steroid biosynthetic process regulation of cholesterol biosynthetic process regulation of cholesterol metabolic process steroid metabolic process regulation of lipid metabolic process sterol metabolic process cholesterol metabolic process lipid biosynthetic process alcohol metabolic process regulation of primary metabolic process positive regulation of metabolic process regulation of small molecule metabolic process positive regulation of biosynthetic process positive regulation of lipid metabolic process small molecule metabolic process steroid biosynthetic process positive regulation of cellular process regulation of biosynthetic process secondary alcohol biosynthetic process regulation of alcohol biosynthetic process small molecule biosynthetic process regulation of steroid metabolic process cholesterol biosynthetic process positive regulation of cholesterol biosynthetic process primary metabolic process secondary alcohol metabolic process positive regulation of steroid biosynthetic process biosynthetic process sterol biosynthetic process positive regulation of lipid biosynthetic process regulation of sterol biosynthetic process alcohol biosynthetic process positive regulation of cholesterol metabolic process positive regulation of steroid metabolic process metabolic process regulation of lipid biosynthetic process positive regulation of small molecule metabolic process regulation of metabolic process positive regulation of alcohol biosynthetic process positive regulation of sterol biosynthetic process lipid metabolic process cell surface receptor signaling pathway response to cytokine response to chemokine cytokine-mediated signaling pathway cellular response to chemokine chemokine-mediated signaling pathway response to peptide cellular response to cytokine stimulus adenylate cyclase-inhibiting dopamine receptor signaling pathway cellular response to nitrogen compound response to dopamine cellular response to dopamine response to monoamine response to catecholamine cellular response to catecholamine stimulus G protein-coupled dopamine receptor signaling pathway cellular response to oxygen-containing compound cellular response to chemical stimulus cellular response to monoamine stimulus adenylate cyclase-activating G protein-coupled receptor signaling pathway regulation of cytoskeleton organization regulation of cellular component organization regulation of mitotic spindle organization regulation of cell cycle spindle organization regulation of cell cycle process regulation of microtubule-based process regulation of spindle organization regulation of organelle organization mitotic spindle organization regulation of microtubule cytoskeleton organization positive regulation of protein localization to cell periphery regulation of localization protein localization to cell periphery regulation of protein localization positive regulation of protein localization to cell cortex regulation of protein localization to cell periphery regulation of protein localization to cell cortex macromolecule localization positive regulation of protein localization intracellular protein localization protein localization to cell cortex regulated exocytosis transport cell activation involved in immune response leukocyte degranulation myeloid leukocyte activation myeloid leukocyte mediated immunity vesicle-mediated transport leukocyte activation secretion by cell leukocyte activation involved in immune response mast cell activation leukocyte mediated immunity mast cell mediated immunity immune response secretion cell activation vacuolar localization export from cell mast cell degranulation myeloid cell activation involved in immune response immune effector process mast cell activation involved in immune response exocytosis lysosome localization response to ketone response to prostaglandin response to lipid response to alcohol response to prostaglandin E cellular response to forskolin cellular response to alcohol response to forskolin cellular response to lipid cellular response to ketone regulation of Wnt signaling pathway regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway Wnt signaling pathway regulation of body fluid levels wound healing hemostasis blood coagulation response to stress coagulation regulation of biological quality response to wounding regulation of protein stability protein stabilization phospholipase C-activating serotonin receptor signaling pathway phospholipase C-activating G protein-coupled receptor signaling pathway rhythmic process entrainment of circadian clock circadian rhythm response to external stimulus regulation of circadian rhythm hormone-mediated signaling pathway cellular response to endogenous stimulus cellular response to hormone stimulus positive regulation of cell communication regulation of hormone secretion gonadotropin secretion positive regulation of secretion by cell hormone secretion positive regulation of hormone secretion regulation of secretion by cell positive regulation of secretion signal release positive regulation of gonadotropin secretion regulation of transport regulation of hormone levels regulation of gonadotropin secretion cell-cell signaling regulation of secretion endocrine process positive regulation of transport hormone transport regulation of endocrine process positive regulation of signaling regulation of membrane depolarization membrane depolarization positive regulation of membrane depolarization regulation of membrane potential response to pH cellular response to pH response to abiotic stimulus cellular response to acidic pH response to acidic pH cellular response to abiotic stimulus cellular response to environmental stimulus glutamate receptor signaling pathway sensory perception nervous system process sensory perception of itch phospholipase C-activating tachykinin receptor signaling pathway tachykinin receptor signaling pathway detection of light stimulus response to light stimulus phototransduction detection of external stimulus detection of visible light detection of abiotic stimulus detection of stimulus response to radiation phototransduction, visible light regulation of cell activation regulation of platelet activation platelet activation phospholipase C-activating G protein-coupled glutamate receptor signaling pathway G protein-coupled glutamate receptor signaling pathway synaptic signaling cellular response to acetylcholine acetylcholine receptor signaling pathway postsynaptic signal transduction G protein-coupled acetylcholine receptor signaling pathway response to acetylcholine chemical homeostasis homeostatic process glucose homeostasis carbohydrate homeostasis	intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton membrane extracellular exosome membrane-bounded organelle extracellular vesicle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region vesicle extracellular membrane-bounded organelle cytoplasm cytosol vacuolar membrane lytic vacuole vacuole intracellular membrane-bounded organelle lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane lysosome cilium plasma membrane bounded cell projection ciliary basal body cell projection microtubule organizing center midbody cell periphery cell cortex protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane plasma membrane membrane protein complex heterotrimeric G-protein complex side of membrane cytoplasmic side of plasma membrane GTPase complex extrinsic component of membrane extrinsic component of cytoplasmic side of plasma membrane centrosome nucleus nuclear membrane endomembrane system organelle envelope nuclear envelope non-motile cilium 9+0 non-motile cilium neuron projection photoreceptor outer segment photoreceptor cell cilium Golgi apparatus postsynapse synapse cell junction postsynaptic cytosol
A	Free fatty acid receptor 4	molecular transducer activity G protein-coupled receptor activity transmembrane signaling receptor activity signaling receptor activity protein binding binding arrestin family protein binding fatty acid binding organic acid binding ion binding anion binding lipid binding carboxylic acid binding monocarboxylic acid binding molecular transducer activity G protein-coupled receptor activity transmembrane signaling receptor activity signaling receptor activity protein binding binding arrestin family protein binding fatty acid binding organic acid binding ion binding anion binding lipid binding carboxylic acid binding monocarboxylic acid binding small molecule binding taste receptor activity	positive regulation of cytosolic calcium ion concentration biological regulation regulation of biological quality regulation of localization nitrogen compound transport regulation of hormone secretion regulation of cellular process regulation of peptide secretion transport signaling negative regulation of signaling negative regulation of biological process negative regulation of transport hormone secretion positive regulation of cytosolic calcium ion concentration biological regulation regulation of biological quality regulation of localization nitrogen compound transport regulation of hormone secretion regulation of cellular process regulation of peptide secretion transport signaling negative regulation of signaling negative regulation of biological process negative regulation of transport hormone secretion somatostatin secretion negative regulation of cell communication cell communication negative regulation of peptide secretion negative regulation of somatostatin secretion localization peptide secretion secretion by cell regulation of secretion by cell negative regulation of secretion signal release negative regulation of hormone secretion negative regulation of cellular process negative regulation of secretion by cell regulation of peptide hormone secretion regulation of biological process regulation of signaling negative regulation of peptide hormone secretion secretion regulation of transport regulation of hormone levels regulation of peptide transport cell-cell signaling export from cell establishment of localization regulation of secretion peptide transport regulation of somatostatin secretion peptide hormone secretion hormone transport regulation of cell communication cellular process cellular response to stimulus positive regulation of cell communication positive regulation of signal transduction response to stimulus positive regulation of biological process regulation of signal transduction intracellular signal transduction positive regulation of response to stimulus positive regulation of ERK1 and ERK2 cascade regulation of intracellular signal transduction intracellular signaling cassette signal transduction positive regulation of cellular process positive regulation of MAPK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade regulation of response to stimulus MAPK cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade positive regulation of signaling negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death regulation of defense response regulation of response to external stimulus negative regulation of inflammatory response defense response negative regulation of response to stimulus response to external stimulus regulation of inflammatory response response to stress negative regulation of response to external stimulus regulation of response to stress negative regulation of defense response inflammatory response hexose transmembrane transport carbohydrate transport transmembrane transport regulation of transmembrane transport D-glucose transmembrane transport regulation of D-glucose transmembrane transport monosaccharide transmembrane transport carbohydrate transmembrane transport multicellular organismal process interleukin-1 production regulation of interleukin-1 beta production negative regulation of interleukin-1 beta production negative regulation of interleukin-1 production regulation of cytokine production cytokine production regulation of multicellular organismal process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of interleukin-1 production negative regulation of metabolic process negative regulation of cytokine production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process interleukin-1 beta production negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process negative regulation of multicellular organismal process regulation of metabolic process adenylate cyclase-activating G protein-coupled receptor signaling pathway adenylate cyclase-modulating G protein-coupled receptor signaling pathway G protein-coupled receptor signaling pathway ghrelin secretion homeostatic process adaptive thermogenesis multicellular organismal-level homeostasis regulation of cold-induced thermogenesis cold-induced thermogenesis temperature homeostasis positive regulation of cold-induced thermogenesis positive regulation of multicellular organismal process developmental process regulation of osteoblast differentiation cellular developmental process regulation of developmental process regulation of cell differentiation osteoblast differentiation positive regulation of developmental process positive regulation of osteoblast differentiation ossification positive regulation of cell differentiation cell differentiation phospholipase C-activating G protein-coupled receptor signaling pathway fat cell differentiation positive regulation of brown fat cell differentiation positive regulation of fat cell differentiation regulation of brown fat cell differentiation brown fat cell differentiation regulation of fat cell differentiation glucagon secretion positive regulation of secretion by cell positive regulation of hormone secretion positive regulation of secretion regulation of glucagon secretion positive regulation of peptide secretion positive regulation of glucagon secretion positive regulation of peptide hormone secretion positive regulation of transport white fat cell differentiation	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection cell periphery plasma membrane membrane intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection cell periphery plasma membrane membrane intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cytoplasm vesicle endocytic vesicle ciliary membrane bounding membrane of organelle plasma membrane region organelle membrane cell projection membrane vacuolar membrane lytic vacuole vacuole lytic vacuole membrane lysosomal membrane lysosome endosome membrane endosome endomembrane system cytoplasmic vesicle membrane vesicle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR001019	Guanine nucleotide binding protein, alpha subunit	Family
B	IPR011025	G protein alpha subunit, helical insertion	Homologous Superfamily
B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B	IPR001408	G-protein alpha subunit, group I	Family
B	IPR001019	Guanine nucleotide binding protein, alpha subunit	Family
B	IPR000654	G-protein alpha subunit, group Q	Family
B	IPR011025	G protein alpha subunit, helical insertion	Homologous Superfamily
B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A	IPR000276	G protein-coupled receptor, rhodopsin-like	Family
A	IPR017452	GPCR, rhodopsin-like, 7TM	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	: P50148	substance withdrawal syndrome dissociative amnesia malignant glioma nicotine dependence pancreatic ductal adenocarcinoma acute myeloid leukemia Withdrawal Symptoms breast cancer glioblastoma intellectual disability large cell medulloblastoma malignant pancreatic neoplasm oligodendroglioma Pick disease astrocytic tumor substance withdrawal syndrome dissociative amnesia malignant glioma nicotine dependence pancreatic ductal adenocarcinoma acute myeloid leukemia Withdrawal Symptoms breast cancer glioblastoma intellectual disability large cell medulloblastoma malignant pancreatic neoplasm oligodendroglioma Pick disease astrocytic tumor breast carcinoma interstitial cystitis malignant colon neoplasm medulloblastoma ovarian cancer subependymal giant cell astrocytoma amnestic disorder atypical teratoid rhabdoid tumor breast fibroadenoma ductal breast carcinoma in situ invasive ductal breast carcinoma Sturge-Weber syndrome melanoma uveal melanoma familial multiple nevi flammei Albuminuria focal segmental glomerulosclerosis cutaneous melanoma lung adenocarcinoma malignant colon neoplasm ocular melanoma pancreatic intraductal papillary-mucinous carcinoma phakomatosis cesioflammea cerebrovascular disorder progressive supranuclear palsy juvenile dermatomyositis lung cancer malignant ependymoma malignant pancreatic neoplasm osteosarcoma atypical teratoid rhabdoid tumor pancreatic intraductal papillary-mucinous neoplasm breast cancer Pick disease psoriasis Crohn disease tuberculosis glioblastoma large cell medulloblastoma malignant choroid melanoma malignant glioma medulloblastoma non-small cell lung carcinoma ovarian cancer blood coagulation disease pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia congenital heart disease rheumatoid arthritis ulcerative colitis
A	: Q5NUL3	BODY MASS INDEX QUANTITATIVE TRAIT LOCUS 10 atypical teratoid rhabdoid tumor large cell medulloblastoma non-small cell lung carcinoma lung carcinoma pancreatic intraductal papillary-mucinous carcinoma Crohn disease medulloblastoma pituitary cancer

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.