Annotations: 9WQU

b-b' domain fragment of ER-60 (ERp57) under microgravity

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	RVP	e9wquC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
B	RVP	e9wquB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
A	RVP	e9wquA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF13848	Thioredoxin-like domain (Thioredoxin_6)	Thioredoxin-like domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Protein disulfide-isomerase A3	RNA binding binding lncRNA binding nucleic acid binding phosphoric ester hydrolase activity phospholipase activity hydrolase activity, acting on ester bonds phosphoric diester hydrolase activity glycerophospholipase activity hydrolase activity C-type glycerophospholipase activity catalytic activity lipase activity cysteine-type peptidase activity RNA binding binding lncRNA binding nucleic acid binding phosphoric ester hydrolase activity phospholipase activity hydrolase activity, acting on ester bonds phosphoric diester hydrolase activity glycerophospholipase activity hydrolase activity C-type glycerophospholipase activity catalytic activity lipase activity cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity endopeptidase activity isomerase activity intramolecular oxidoreductase activity intramolecular oxidoreductase activity, transposing S-S bonds protein disulfide isomerase activity oxidoreductase activity, acting on a sulfur group of donors disulfide oxidoreductase activity oxidoreductase activity protein-disulfide reductase activity protein folding chaperone identical protein binding protein binding	response to stimulus immune response immune system process adaptive immune response protein folding biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation response to stimulus immune response immune system process adaptive immune response protein folding biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation protein folding in endoplasmic reticulum peptide antigen assembly with MHC class I protein complex protein-containing complex organization peptide antigen assembly with MHC protein complex MHC class I protein complex assembly cellular component organization cellular component biogenesis antigen processing and presentation cellular component assembly protein-containing complex assembly antigen processing and presentation of peptide antigen via MHC class I MHC protein complex assembly cellular component organization or biogenesis antigen processing and presentation of peptide antigen cellular response to stimulus cellular response to stress response to stress response to endoplasmic reticulum stress	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction membrane-bounded organelle intracellular anatomical structure pigment granule intracellular vesicle intracellular membrane-bounded organelle intracellular organelle melanosome cytoplasmic vesicle organelle cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction membrane-bounded organelle intracellular anatomical structure pigment granule intracellular vesicle intracellular membrane-bounded organelle intracellular organelle melanosome cytoplasmic vesicle organelle cytoplasm vesicle extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular membrane-bounded organelle cell surface phagocytic vesicle endocytic vesicle endosome membrane membrane endosome recycling endosome endomembrane system cytoplasmic vesicle membrane bounding membrane of organelle recycling endosome membrane vesicle membrane organelle membrane membrane-enclosed lumen intracellular organelle lumen endoplasmic reticulum lumen organelle lumen endoplasmic reticulum protein-containing complex MHC class I peptide loading complex organelle subcompartment membrane protein complex endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum protein-containing complex endoplasmic reticulum membrane nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR017937	Thioredoxin, conserved site	Conserved Site
A, B, C	IPR005788	Protein disulfide-isomerase, thioredoxin-like domain	Domain
A, B, C	IPR005792	Protein disulphide isomerase	Family
A, B, C	IPR013766	Thioredoxin domain	Domain
A, B, C	IPR041868	Protein disulfide-isomerase A3, first redox inactive TRX-like domain b	Domain
A, B, C	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C	: P30101	spinocerebellar ataxia type 17 acute coronary syndrome cancer prostate cancer plasma cell myeloma glioblastoma Liver carcinoma metabolic syndrome X osteosarcoma pancreatic intraductal papillary-mucinous carcinoma astrocytic tumor Crohn disease hepatocellular carcinoma lung adenocarcinoma myopathy spinocerebellar ataxia type 17 acute coronary syndrome cancer prostate cancer plasma cell myeloma glioblastoma Liver carcinoma metabolic syndrome X osteosarcoma pancreatic intraductal papillary-mucinous carcinoma astrocytic tumor Crohn disease hepatocellular carcinoma lung adenocarcinoma myopathy ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia benign neoplasm Duchenne muscular dystrophy juvenile dermatomyositis malignant ependymoma pancreatic ductal adenocarcinoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.