Annotations: 9WIZ

Structural Analysis of a Plant Glycoside Hydrolase Family 116 Glucosyl Ceramidase by Cryogenic Electron Microscopy (Cryo-EM)

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Thioredoxin	e9wizA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Thioredoxin	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E]	PF12215	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term (Glyco_hydr_116N)	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term	-	Family
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E]	PF04685	Glycosyl-hydrolase family 116, catalytic region (GH116_catalytic)	Glycosyl-hydrolase family 116, catalytic region	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E]	Non-lysosomal glucosylceramidase	hydrolase activity, acting on glycosyl bonds glucosidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity beta-glucosidase activity catalytic activity glucosylceramidase activity glycosylceramidase activity	carbohydrate metabolic process primary metabolic process metabolic process cellular process sphingolipid catabolic process ceramide metabolic process carbohydrate derivative catabolic process glycosphingolipid catabolic process lipid catabolic process catabolic process glycolipid metabolic process glycosphingolipid metabolic process liposaccharide metabolic process carbohydrate derivative metabolic process carbohydrate metabolic process primary metabolic process metabolic process cellular process sphingolipid catabolic process ceramide metabolic process carbohydrate derivative catabolic process glycosphingolipid catabolic process lipid catabolic process catabolic process glycolipid metabolic process glycosphingolipid metabolic process liposaccharide metabolic process carbohydrate derivative metabolic process sphingolipid metabolic process glucosylceramide metabolic process glycosylceramide catabolic process glycolipid catabolic process ceramide catabolic process glucosylceramide catabolic process glycosylceramide metabolic process lipid metabolic process	cellular anatomical structure membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E]	IPR012341	Six-hairpin glycosidase-like superfamily	Homologous Superfamily
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E]	IPR014551	Beta-glucosidase GBA2-type	Family
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E]	IPR024462	Glycosyl-hydrolase family 116, N-terminal	Domain
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E]	IPR052566	Non-lysosomal glucosylceramidase	Family
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E]	IPR008928	Six-hairpin glycosidase superfamily	Homologous Superfamily
A, B, C, D, E [auth F], A, B, C, D, E [auth F], F [auth E]	IPR006775	Glycosyl-hydrolase family 116, catalytic region	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9WIZ | pdb_00009wiz

Structural Analysis of a Plant Glycoside Hydrolase Family 116 Glucosyl Ceramidase by Cryogenic Electron Microscopy (Cryo-EM)

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage