Annotations: 9WDC

Cryo-EM structure of collagenase H (E416Q mutant) from Hathewaya histolytica bound to C-terminal region of the collagen-binding protein ColH (Pro-Pro-Gly)10

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Thioredoxin	e9wdcA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Thioredoxin	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, C, D	(Pro-Pro-Gly)10	structural molecule activity extracellular matrix structural constituent extracellular matrix structural constituent conferring tensile strength	cellular component organization extracellular matrix organization cellular process cellular component organization or biogenesis extracellular structure organization external encapsulating structure organization	host cellular component cellular anatomical structure host cell part host cell membrane other organism part extracellular matrix external encapsulating structure extracellular region
A	Collagenase ColH	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity metalloendopeptidase activity metallopeptidase activity transition metal ion binding cation binding ion binding binding calcium ion binding metal ion binding small molecule binding peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity metalloendopeptidase activity metallopeptidase activity transition metal ion binding zinc ion binding tripeptidase activity exopeptidase activity collagen binding protein-containing complex binding	collagen metabolic process metabolic process cellular process proteolysis primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, C, D	IPR008160	Collagen triple helix repeat	Repeat
B, C, D	IPR017095	Saimiri transformation-associated protein	Family
B, C, D	IPR050149	Collagen_superfamily	Unknown
A	IPR022409	PKD/Chitinase domain	Domain
A	IPR000601	PKD domain	Domain
A	IPR013661	Peptidase M9, collagenase, N-terminal domain	Domain
A	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	Homologous Superfamily
A	IPR035986	PKD domain superfamily	Homologous Superfamily
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR041379	Collagenase ColG-like, catalytic helper subdomain	Domain
A	IPR007280	Peptidase, C-terminal, archaeal/bacterial	Domain
A	IPR002169	Peptidase M9A/M9B, collagenase, bacterial	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9WDC | pdb_00009wdc

Cryo-EM structure of collagenase H (E416Q mutant) from Hathewaya histolytica bound to C-terminal region of the collagen-binding protein ColH (Pro-Pro-Gly)10

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage