Annotations: 9W1J

Cryo-EM structure of neurokinin A (NKA)-bound neurokinin 2 receptor (NK2R) in complex with miniGs/q70

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
F [auth B]	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	protein binding binding enzyme binding GTPase binding protein-containing complex binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity signaling receptor complex adaptor activity protein-macromolecule adaptor activity protein binding binding enzyme binding GTPase binding protein-containing complex binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity signaling receptor complex adaptor activity protein-macromolecule adaptor activity molecular adaptor activity signaling adaptor activity	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cellular process signal transduction cell communication response to ketone response to prostaglandin response to lipid response to endogenous stimulus response to alcohol cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cellular process signal transduction cell communication response to ketone response to prostaglandin response to lipid response to endogenous stimulus response to alcohol cellular response to prostaglandin stimulus response to oxygen-containing compound cellular response to oxygen-containing compound cellular response to endogenous stimulus cellular response to prostaglandin E stimulus cellular response to chemical stimulus cellular response to alcohol response to hormone response to chemical cellular response to lipid response to prostaglandin E cellular response to ketone cellular response to hormone stimulus small GTPase-mediated signal transduction Ras protein signal transduction intracellular signal transduction intracellular signaling cassette cellular response to nitrogen compound response to dopamine cellular response to dopamine response to monoamine response to catecholamine adenylate cyclase-activating dopamine receptor signaling pathway cellular response to catecholamine stimulus G protein-coupled dopamine receptor signaling pathway response to nitrogen compound adenylate cyclase-activating G protein-coupled receptor signaling pathway cellular response to monoamine stimulus adenylate cyclase-modulating G protein-coupled receptor signaling pathway G protein-coupled receptor signaling pathway synaptic signaling cellular response to acetylcholine cell-cell signaling acetylcholine receptor signaling pathway postsynaptic signal transduction G protein-coupled acetylcholine receptor signaling pathway response to acetylcholine	cellular anatomical structure membrane protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane plasma membrane membrane protein complex heterotrimeric G-protein complex side of membrane cell periphery cytoplasmic side of plasma membrane GTPase complex cellular anatomical structure membrane protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane plasma membrane membrane protein complex heterotrimeric G-protein complex side of membrane cell periphery cytoplasmic side of plasma membrane GTPase complex extrinsic component of membrane extrinsic component of cytoplasmic side of plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle non-motile cilium 9+0 non-motile cilium cilium neuron projection photoreceptor disc membrane photoreceptor outer segment plasma membrane bounded cell projection cell projection photoreceptor cell cilium organelle membrane intracellular anatomical structure cytoplasm cytosol vacuolar membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle lysosomal membrane lysosome synapse cell junction
E [auth R]	Substance-K receptor	peptide receptor activity molecular transducer activity G protein-coupled receptor activity G protein-coupled peptide receptor activity signaling receptor activity transmembrane signaling receptor activity tachykinin receptor activity neuropeptide receptor activity substance K receptor activity	regulation of localization regulation of biological process transport regulation of transport regulation of monoatomic ion transport biological regulation positive regulation of biological process establishment of localization localization positive regulation of transport positive regulation of monoatomic ion transport monoatomic ion transport establishment of protein localization nitrogen compound transport regulation of localization regulation of biological process transport regulation of transport regulation of monoatomic ion transport biological regulation positive regulation of biological process establishment of localization localization positive regulation of transport positive regulation of monoatomic ion transport monoatomic ion transport establishment of protein localization nitrogen compound transport signaling hormone secretion cell communication protein localization to extracellular region peptide secretion secretion by cell signal release regulation of biological quality intracellular protein localization secretion regulation of hormone levels prolactin secretion establishment of protein localization to extracellular region cell-cell signaling export from cell protein secretion peptide transport protein transport peptide hormone secretion macromolecule localization hormone transport cellular process intestine smooth muscle contraction multicellular organismal process gastro-intestinal system smooth muscle contraction system process smooth muscle contraction phasic smooth muscle contraction muscle contraction muscle system process negative regulation of luteinizing hormone secretion regulation of hormone secretion regulation of cellular process gonadotropin secretion negative regulation of signaling regulation of system process negative regulation of biological process negative regulation of transport negative regulation of cell communication regulation of secretion by cell negative regulation of secretion regulation of luteinizing hormone secretion luteinizing hormone secretion negative regulation of hormone secretion negative regulation of cellular process regulation of multicellular organismal process negative regulation of secretion by cell regulation of signaling regulation of gonadotropin secretion regulation of secretion endocrine process negative regulation of gonadotropin secretion regulation of cell communication negative regulation of multicellular organismal process regulation of endocrine process positive regulation of smooth muscle contraction positive regulation of uterine smooth muscle contraction regulation of muscle system process uterine smooth muscle contraction regulation of smooth muscle contraction regulation of muscle contraction positive regulation of muscle contraction regulation of uterine smooth muscle contraction positive regulation of multicellular organismal process cellular response to stimulus response to stimulus adenylate cyclase-activating G protein-coupled receptor signaling pathway adenylate cyclase-modulating G protein-coupled receptor signaling pathway G protein-coupled receptor signaling pathway signal transduction response to electrical stimulus response to abiotic stimulus positive regulation of cell communication positive regulation of neurotransmitter secretion positive regulation of amine transport acetylcholine secretion, neurotransmission establishment of localization in cell positive regulation of acetylcholine secretion, neurotransmission trans-synaptic signaling positive regulation of neurotransmitter transport positive regulation of synaptic transmission, cholinergic neurotransmitter secretion positive regulation of synaptic transmission regulation of acetylcholine secretion, neurotransmission neurotransmitter transport acetate ester transport signal release from synapse acetylcholine transport regulation of trans-synaptic signaling cellular localization modulation of chemical synaptic transmission positive regulation of secretion by cell synaptic signaling positive regulation of secretion acetylcholine secretion positive regulation of cellular process regulation of neurotransmitter transport chemical synaptic transmission amine transport regulation of neurotransmitter secretion anterograde trans-synaptic signaling synaptic transmission, cholinergic regulation of amine transport regulation of synaptic transmission, cholinergic positive regulation of signaling positive regulation of locomotion regulation of cell motility regulation of reproductive process reproductive process regulation of cilium-dependent cell motility positive regulation of flagellated sperm motility cilium or flagellum-dependent cell motility regulation of flagellated sperm motility cilium-dependent cell motility positive regulation of cell motility positive regulation of cilium movement cell motility locomotion positive regulation of reproductive process sperm motility positive regulation of cilium-dependent cell motility regulation of microtubule-based process regulation of microtubule-based movement cilium movement involved in cell motility regulation of cilium movement regulation of locomotion flagellated sperm motility microtubule-based movement microtubule-based process cilium movement regulation of cilium movement involved in cell motility phospholipase C-activating tachykinin receptor signaling pathway phospholipase C-activating G protein-coupled receptor signaling pathway tachykinin receptor signaling pathway regulation of vascular permeability circulatory system process positive regulation of vascular permeability vascular process in circulatory system blood circulation behavior learning learning or memory nervous system process cognition operant conditioning	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium 9+2 motile cilium sperm flagellum motile cilium plasma membrane bounded cell projection cell periphery plasma membrane membrane sperm midpiece sperm head
D [auth N]	Nanobody 35	-	-	-
C [auth L]	Protachykinin-1	protein binding binding signaling receptor binding substance P receptor binding neurokinin receptor binding G protein-coupled receptor binding neuropeptide receptor binding	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell communication G protein-coupled receptor signaling pathway cellular process signal transduction neuropeptide signaling pathway positive regulation of cytosolic calcium ion concentration regulation of biological quality multicellular organismal process cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell communication G protein-coupled receptor signaling pathway cellular process signal transduction neuropeptide signaling pathway positive regulation of cytosolic calcium ion concentration regulation of biological quality multicellular organismal process system process circulatory system process regulation of blood pressure blood circulation detection of stimulus response to abiotic stimulus detection of abiotic stimulus regulation of defense response regulation of response to external stimulus defense response positive regulation of biological process response to external stimulus regulation of inflammatory response positive regulation of acute inflammatory response positive regulation of response to stimulus positive regulation of response to external stimulus positive regulation of inflammatory response regulation of response to stimulus response to stress regulation of response to stress positive regulation of defense response regulation of acute inflammatory response inflammatory response acute inflammatory response positive regulation of cell communication modulation of chemical synaptic transmission positive regulation of synaptic transmission, GABAergic synaptic signaling positive regulation of cellular process trans-synaptic signaling regulation of signaling synaptic transmission, GABAergic positive regulation of synaptic transmission cell-cell signaling chemical synaptic transmission regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of cell communication positive regulation of signaling regulation of synaptic transmission, GABAergic adenylate cyclase-activating G protein-coupled receptor signaling pathway adenylate cyclase-modulating G protein-coupled receptor signaling pathway behavior learning or memory long-term memory nervous system process cognition memory regulation of action potential positive regulation of action potential action potential regulation of membrane potential phospholipase C-activating tachykinin receptor signaling pathway phospholipase C-activating G protein-coupled receptor signaling pathway tachykinin receptor signaling pathway positive regulation of cell population proliferation regulation of leukocyte activation regulation of cell activation lymphocyte activation leukocyte proliferation leukocyte activation positive regulation of lymphocyte activation positive regulation of cell activation lymphocyte proliferation positive regulation of leukocyte activation positive regulation of mononuclear cell proliferation regulation of immune system process regulation of multicellular organismal process positive regulation of immune system process regulation of lymphocyte proliferation regulation of leukocyte proliferation cell population proliferation cell activation positive regulation of lymphocyte proliferation regulation of cell population proliferation mononuclear cell proliferation immune system process positive regulation of leukocyte proliferation regulation of mononuclear cell proliferation positive regulation of multicellular organismal process regulation of lymphocyte activation learning associative learning ossification positive regulation of ossification regulation of ossification heart process negative regulation of heart rate regulation of heart contraction regulation of system process negative regulation of biological process negative regulation of blood circulation negative regulation of heart contraction regulation of blood circulation heart contraction negative regulation of multicellular organismal process regulation of heart rate positive regulation of synaptic transmission, cholinergic synaptic transmission, cholinergic regulation of synaptic transmission, cholinergic multi-multicellular organism process reproductive process multicellular organismal reproductive process reproductive behavior insemination mating behavior multi-organism reproductive process copulation regulation of localization corticosterone secretion positive regulation of steroid hormone secretion localization regulation of glucocorticoid secretion positive regulation of glucocorticoid secretion regulation of steroid hormone secretion positive regulation of corticosteroid hormone secretion regulation of hormone levels lipid transport regulation of corticosteroid hormone secretion establishment of localization regulation of secretion positive regulation of lipid transport lipid export from cell glucocorticoid secretion regulation of endocrine process corticosteroid hormone secretion regulation of corticosterone secretion regulation of hormone secretion transport steroid hormone secretion regulation of lipid transport positive regulation of secretion by cell organic hydroxy compound transport hormone secretion positive regulation of corticosterone secretion secretion by cell positive regulation of hormone secretion regulation of secretion by cell positive regulation of secretion signal release secretion regulation of transport export from cell lipid localization positive regulation of lipid localization endocrine process positive regulation of transport regulation of lipid localization macromolecule localization hormone transport biological process involved in interspecies interaction between organisms response to lipid response to other organism response to oxygen-containing compound response to lipopolysaccharide response to biotic stimulus response to bacterium response to chemical response to external biotic stimulus response to molecule of bacterial origin positive regulation of organelle organization regulation of cytoskeleton organization regulation of cellular component organization regulation of actin filament-based process positive regulation of cellular component organization regulation of actin filament bundle assembly cellular component biogenesis cellular component organization cellular component assembly positive regulation of actin filament bundle assembly actin filament bundle organization positive regulation of stress fiber assembly actin filament-based process cellular component organization or biogenesis stress fiber assembly regulation of actin filament organization actin cytoskeleton organization actomyosin structure organization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization actin filament organization regulation of cellular component biogenesis positive regulation of supramolecular fiber organization regulation of organelle organization regulation of stress fiber assembly organelle organization contractile actin filament bundle assembly regulation of actomyosin structure organization regulation of actin cytoskeleton organization actin filament bundle assembly regulation of supramolecular fiber organization supramolecular fiber organization cytoskeleton organization response to hormone response to endogenous stimulus positive regulation of locomotion regulation of cell motility positive regulation of cell migration positive regulation of epithelial cell migration tissue migration ameboidal-type cell migration positive regulation of cell motility regulation of cell migration cell migration epithelial cell migration cell motility regulation of epithelial cell migration locomotion epithelium migration regulation of locomotion	membrane-bounded organelle intracellular anatomical structure dense core granule intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle secretory granule secretory vesicle cytoplasm vesicle membrane-bounded organelle intracellular anatomical structure dense core granule intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle secretory granule secretory vesicle cytoplasm vesicle neuronal dense core vesicle extracellular region synapse cell junction somatodendritic compartment cell body neuronal cell body axon cell projection neuron projection plasma membrane bounded cell projection
B [auth G]	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2	protein binding binding G-protein beta-subunit binding	cellular response to nitrogen compound cellular response to stimulus response to dopamine regulation of cellular process response to stimulus signaling cellular response to dopamine response to monoamine cell communication response to catecholamine adenylate cyclase-activating dopamine receptor signaling pathway cellular response to catecholamine stimulus signal transduction regulation of biological process cellular response to nitrogen compound cellular response to stimulus response to dopamine regulation of cellular process response to stimulus signaling cellular response to dopamine response to monoamine cell communication response to catecholamine adenylate cyclase-activating dopamine receptor signaling pathway cellular response to catecholamine stimulus signal transduction regulation of biological process G protein-coupled dopamine receptor signaling pathway biological regulation response to oxygen-containing compound response to nitrogen compound adenylate cyclase-activating G protein-coupled receptor signaling pathway cellular response to oxygen-containing compound cellular response to chemical stimulus cellular response to monoamine stimulus response to chemical adenylate cyclase-modulating G protein-coupled receptor signaling pathway cellular process G protein-coupled receptor signaling pathway response to ketone response to prostaglandin response to lipid response to endogenous stimulus response to alcohol cellular response to prostaglandin stimulus cellular response to endogenous stimulus cellular response to prostaglandin E stimulus cellular response to alcohol response to hormone cellular response to lipid response to prostaglandin E cellular response to ketone cellular response to hormone stimulus	cellular anatomical structure membrane protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane plasma membrane membrane protein complex heterotrimeric G-protein complex side of membrane cell periphery cytoplasmic side of plasma membrane GTPase complex cellular anatomical structure membrane protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane plasma membrane membrane protein complex heterotrimeric G-protein complex side of membrane cell periphery cytoplasmic side of plasma membrane GTPase complex extrinsic component of membrane extrinsic component of cytoplasmic side of plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle synapse cell junction
A	Guanine nucleotide-binding protein G(s) subunit alpha isoforms short	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F [auth B]	IPR019775	WD40 repeat, conserved site	Conserved Site
F [auth B]	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
F [auth B]	IPR001632	G-protein beta subunit-like, WD40 repeats	Domain
F [auth B]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
F [auth B]	IPR016346	G-protein subunit beta 1-5	Family
F [auth B]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
F [auth B]	IPR001680	WD40 repeat	Repeat
E [auth R]	IPR000276	G protein-coupled receptor, rhodopsin-like	Family
E [auth R]	IPR001681	Neurokinin receptor	Family
E [auth R]	IPR017452	GPCR, rhodopsin-like, 7TM	Domain
E [auth R]	IPR000913	Neurokinin NK2 receptor	Family
C [auth L]	IPR008216	Tachykinin family	Family
C [auth L]	IPR013055	Tachykinin/Neurokinin-like, conserved site	Conserved Site
C [auth L]	IPR008215	Tachykinin domain	Domain
B [auth G]	IPR001770	G-protein, gamma subunit	Family
B [auth G]	IPR015898	G-protein, gamma subunit-like domain	Domain
B [auth G]	IPR036284	G-protein gamma-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
F [auth B]	: P62873	intellectual disability, autosomal dominant 42 melancholia intellectual disability endogenous depression medulloblastoma myopathy ovarian cancer Precursor Cell Lymphoblastic Leukemia Lymphoma anxiety disorder Sjogren syndrome chronic kidney disease juvenile dermatomyositis lung adenocarcinoma neurotic disorder pancreatic ductal adenocarcinoma intellectual disability, autosomal dominant 42 melancholia intellectual disability endogenous depression medulloblastoma myopathy ovarian cancer Precursor Cell Lymphoblastic Leukemia Lymphoma anxiety disorder Sjogren syndrome chronic kidney disease juvenile dermatomyositis lung adenocarcinoma neurotic disorder pancreatic ductal adenocarcinoma subependymal giant cell astrocytoma breast cancer Duchenne muscular dystrophy leukemia, acute lymphocytic, susceptibility to, 1 malignant pancreatic neoplasm myelodysplastic syndrome osteosarcoma plasma cell myeloma rheumatoid arthritis swine influenza childhood acute lymphoblastic leukemia depressive disorder
E [auth R]	: P21452	bronchial disease psoriasis malignant colon neoplasm vascular disease non-alcoholic fatty liver disease
C [auth L]	: P20366	narcolepsy allergic disease dissociative amnesia drug allergy migraine without aura, susceptibility to, 4 neuralgia Hyperemia schizophrenia corneal disease major depressive disorder gastroesophageal reflux disease bipolar disorder pancreatic intraductal papillary-mucinous neoplasm malignant colon neoplasm pilocytic astrocytoma narcolepsy allergic disease dissociative amnesia drug allergy migraine without aura, susceptibility to, 4 neuralgia Hyperemia schizophrenia corneal disease major depressive disorder gastroesophageal reflux disease bipolar disorder pancreatic intraductal papillary-mucinous neoplasm malignant colon neoplasm pilocytic astrocytoma medulloblastoma psoriasis fibromyalgia glioblastoma oligodendroglioma attention deficit hyperactivity disorder, inattentive type hypotensive disorder interstitial cystitis complex regional pain syndrome pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia malignant ependymoma peripheral neuropathy Down syndrome pituitary cancer narcolepsy-cataplexy syndrome amnestic disorder atypical teratoid rhabdoid tumor invasive ductal breast carcinoma Parkinson disease depressive disorder malignant glioma Pick disease migraine disorder adrenal cortex carcinoma facioscapulohumeral muscular dystrophy astrocytic tumor pain agnosia
B [auth G]	: P59768	pancreatic intraductal papillary-mucinous neoplasm pilocytic astrocytoma sarcoidosis ulcerative colitis adrenal cortex carcinoma breast carcinoma Duchenne muscular dystrophy glioblastoma large cell medulloblastoma medulloblastoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia pituitary cancer Sjogren syndrome X-linked mixed deafness with perilymphatic gusher pancreatic intraductal papillary-mucinous neoplasm pilocytic astrocytoma sarcoidosis ulcerative colitis adrenal cortex carcinoma breast carcinoma Duchenne muscular dystrophy glioblastoma large cell medulloblastoma medulloblastoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia pituitary cancer Sjogren syndrome X-linked mixed deafness with perilymphatic gusher astrocytic tumor Crohn disease ductal breast carcinoma in situ interstitial cystitis lung carcinoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma Pick disease primitive neuroectodermal tumor thoracic aortic aneurysm atypical teratoid rhabdoid tumor cystic fibrosis Emery-Dreifuss muscular dystrophy invasive ductal breast carcinoma malignant ependymoma osteosarcoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9W1J | pdb_00009w1j

Cryo-EM structure of neurokinin A (NKA)-bound neurokinin 2 receptor (NK2R) in complex with miniGs/q70

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation