Annotations: 9V7L

Phycobilisome rod R1 from Gloeobacter violaceus PCC 7421

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Y [auth X]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
W [auth V]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
U [auth T]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
S [auth R]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
Q [auth P]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
O [auth N]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
L [auth K]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
J [auth I]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
H [auth G]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
F [auth E]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
D [auth C]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
AA [auth a]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
Z [auth Y]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
X [auth W]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
V [auth U]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
T [auth S]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
R [auth Q]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
P [auth O]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
M [auth L]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
K [auth J]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
I [auth H]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
G [auth F]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
E [auth D]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Y [auth X]	Ribosomal_S18	e9v7lX1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
W [auth V]	Ribosomal_S18	e9v7lV1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
U [auth T]	Ribosomal_S18	e9v7lT1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
S [auth R]	Ribosomal_S18	e9v7lR1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
Q [auth P]	Ribosomal_S18	e9v7lP1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
O [auth N]	Ribosomal_S18	e9v7lN1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
L [auth K]	Ribosomal_S18	e9v7lK1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
J [auth I]	Ribosomal_S18	e9v7lI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
H [auth G]	Ribosomal_S18	e9v7lG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
F [auth E]	Ribosomal_S18	e9v7lE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
D [auth C]	Ribosomal_S18	e9v7lC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
AA [auth a]	Ribosomal_S18	e9v7la1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
Z [auth Y]	Ribosomal_S18	e9v7lY1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
X [auth W]	Ribosomal_S18	e9v7lW1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
V [auth U]	Ribosomal_S18	e9v7lU1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
T [auth S]	Ribosomal_S18	e9v7lS1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
R [auth Q]	Ribosomal_S18	e9v7lQ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
P [auth O]	Ribosomal_S18	e9v7lO1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
M [auth L]	Ribosomal_S18	e9v7lL1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
K [auth J]	Ribosomal_S18	e9v7lJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
I [auth H]	Ribosomal_S18	e9v7lH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
G [auth F]	Ribosomal_S18	e9v7lF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
E [auth D]	Ribosomal_S18	e9v7lD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)
C [auth B]	Ribosomal_S18	e9v7lB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_S18	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
AA [auth a], D [auth C], F [auth E], H [auth G], J [auth I], AA [auth a], D [auth C], F [auth E], H [auth G], J [auth I], L [auth K], O [auth N], Q [auth P], S [auth R], U [auth T], W [auth V], Y [auth X]	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain
C [auth B], E [auth D], G [auth F], I [auth H], K [auth J], C [auth B], E [auth D], G [auth F], I [auth H], K [auth J], M [auth L], P [auth O], R [auth Q], T [auth S], V [auth U], X [auth W], Z [auth Y]	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain
A	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain
A	PF00427	Phycobilisome Linker polypeptide (PBS_linker_poly)	Phycobilisome Linker polypeptide	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
N [auth M]	Phycocyanin-associated rod linker protein	-	-	-
AA [auth a], D [auth C], F [auth E], H [auth G], J [auth I], AA [auth a], D [auth C], F [auth E], H [auth G], J [auth I], L [auth K], O [auth N], Q [auth P], S [auth R], U [auth T], W [auth V], Y [auth X]	Phycocyanin alpha chain	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
C [auth B], E [auth D], G [auth F], I [auth H], K [auth J], C [auth B], E [auth D], G [auth F], I [auth H], K [auth J], M [auth L], P [auth O], R [auth Q], T [auth S], V [auth U], X [auth W], Z [auth Y]	Phycocyanin beta chain	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
B [auth Z]	Phycocyanin-associated rod linker protein	-	-	-
A	Glr1262 protein	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth a], D [auth C], F [auth E], H [auth G], J [auth I], AA [auth a], D [auth C], F [auth E], H [auth G], J [auth I], L [auth K], O [auth N], Q [auth P], S [auth R], U [auth T], W [auth V], Y [auth X]	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
AA [auth a], D [auth C], F [auth E], H [auth G], J [auth I], AA [auth a], D [auth C], F [auth E], H [auth G], J [auth I], L [auth K], O [auth N], Q [auth P], S [auth R], U [auth T], W [auth V], Y [auth X]	IPR009050	Globin-like superfamily	Homologous Superfamily
AA [auth a], D [auth C], F [auth E], H [auth G], J [auth I], AA [auth a], D [auth C], F [auth E], H [auth G], J [auth I], L [auth K], O [auth N], Q [auth P], S [auth R], U [auth T], W [auth V], Y [auth X]	IPR012128	Phycobilisome, alpha/beta subunit	Family
C [auth B], E [auth D], G [auth F], I [auth H], K [auth J], C [auth B], E [auth D], G [auth F], I [auth H], K [auth J], M [auth L], P [auth O], R [auth Q], T [auth S], V [auth U], X [auth W], Z [auth Y]	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
C [auth B], E [auth D], G [auth F], I [auth H], K [auth J], C [auth B], E [auth D], G [auth F], I [auth H], K [auth J], M [auth L], P [auth O], R [auth Q], T [auth S], V [auth U], X [auth W], Z [auth Y]	IPR009050	Globin-like superfamily	Homologous Superfamily
C [auth B], E [auth D], G [auth F], I [auth H], K [auth J], C [auth B], E [auth D], G [auth F], I [auth H], K [auth J], M [auth L], P [auth O], R [auth Q], T [auth S], V [auth U], X [auth W], Z [auth Y]	IPR012128	Phycobilisome, alpha/beta subunit	Family
A	IPR001297	Phycobilisome linker domain	Domain
A	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily