Annotations: 9V7H

Phycobilisome rod R2 from Gloeobacter violaceus PCC 7421

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
X	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
AA [auth a]	SCOP2B Superfamily	Globin-like	8064884	3000554	SCOP2B (2022-06-29)
Y	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Globin-like	8064828	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X	RVP	e9v7hX1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
V	RVP	e9v7hV1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
T	RVP	e9v7hT1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
R	RVP	e9v7hR1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
P	RVP	e9v7hP1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
N	RVP	e9v7hN1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
K	RVP	e9v7hK1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
I	RVP	e9v7hI1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
G	RVP	e9v7hG1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
E	RVP	e9v7hE1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
C	RVP	e9v7hC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
AA [auth a]	RVP	e9v7ha1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
Y	RVP	e9v7hY1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
W	RVP	e9v7hW1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
U	RVP	e9v7hU1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
S	RVP	e9v7hS1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
Q	RVP	e9v7hQ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
O	RVP	e9v7hO1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
L	RVP	e9v7hL1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
J	RVP	e9v7hJ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
H	RVP	e9v7hH1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
F	RVP	e9v7hF1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
D	RVP	e9v7hD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
B	RVP	e9v7hB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
Z	PF00427	Phycobilisome Linker polypeptide (PBS_linker_poly)	Phycobilisome Linker polypeptide	-	Family
AA [auth a], C, E, G, I, AA [auth a], C, E, G, I, K, N, P, R, T, V, X	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain
B, D, F, H, J B, D, F, H, J, L, O, Q, S, U, W, Y	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain
A	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
Z	Glr1262 protein	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
M	Phycocyanin-associated rod linker protein	-	-	-
AA [auth a], C, E, G, I, AA [auth a], C, E, G, I, K, N, P, R, T, V, X	Phycocyanin alpha chain	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
B, D, F, H, J B, D, F, H, J, L, O, Q, S, U, W, Y	Phycocyanin beta chain	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
A	Phycocyanin-associated rod linker protein	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
Z	IPR001297	Phycobilisome linker domain	Domain
Z	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily
AA [auth a], C, E, G, I, AA [auth a], C, E, G, I, K, N, P, R, T, V, X	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
AA [auth a], C, E, G, I, AA [auth a], C, E, G, I, K, N, P, R, T, V, X	IPR009050	Globin-like superfamily	Homologous Superfamily
AA [auth a], C, E, G, I, AA [auth a], C, E, G, I, K, N, P, R, T, V, X	IPR012128	Phycobilisome, alpha/beta subunit	Family
B, D, F, H, J B, D, F, H, J, L, O, Q, S, U, W, Y	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, O, Q, S, U, W, Y	IPR009050	Globin-like superfamily	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, O, Q, S, U, W, Y	IPR012128	Phycobilisome, alpha/beta subunit	Family

9V7H | pdb_00009v7h

Phycobilisome rod R2 from Gloeobacter violaceus PCC 7421

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage