9TAO | pdb_00009tao

Local refinement of E. coli Complex I D79N NuoA mutant membrane domain in LMNG


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth A]SCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8106938 3002200 SCOP2B (2022-06-29)
B [auth K]SCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8104293 3002200 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth N]PF00361NADH:quinone oxidoreductase/Mrp antiporter, TM (Proton_antipo_M)NADH:quinone oxidoreductase/Mrp antiporter, TMThis entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associa ...This entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N [1]. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction [2].
Domain
F [auth M]PF00361NADH:quinone oxidoreductase/Mrp antiporter, TM (Proton_antipo_M)NADH:quinone oxidoreductase/Mrp antiporter, TMThis entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associa ...This entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N [1]. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction [2].
Domain
E [auth J]PF00499NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Oxidored_q3)NADH-ubiquinone/plastoquinone oxidoreductase chain 6- Family
D [auth A]PF00507NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4)NADH-ubiquinone/plastoquinone oxidoreductase, chain 3- Family
C [auth L]PF00361NADH:quinone oxidoreductase/Mrp antiporter, TM (Proton_antipo_M)NADH:quinone oxidoreductase/Mrp antiporter, TMThis entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associa ...This entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N [1]. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction [2].
Domain
C [auth L]PF00662NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus (Proton_antipo_N)NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminusThis entry represents an amino terminal extension of Pfam:PF00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyses the transfer of two electrons from NADH to ubiquinone in ...This entry represents an amino terminal extension of Pfam:PF00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Domain
B [auth K]PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4L (Oxidored_q2)NADH-ubiquinone/plastoquinone oxidoreductase chain 4L- Family
A [auth H]PF00146NADH dehydrogenase (NADHdh)NADH dehydrogenase- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
G [auth N]NADH-quinone oxidoreductase subunit N
F [auth M]NADH-quinone oxidoreductase subunit M
E [auth J]NADH-quinone oxidoreductase subunit J
D [auth A]NADH-quinone oxidoreductase subunit A
C [auth L]NADH-quinone oxidoreductase subunit L
B [auth K]NADH-quinone oxidoreductase subunit K
A [auth H]NADH-quinone oxidoreductase subunit H

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
G [auth N]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
G [auth N]IPR010096NAD(P)H-quinone oxidoreductase, subunit N/subunit 2Family
F [auth M]IPR003918NADH:ubiquinone oxidoreductaseFamily
F [auth M]IPR010227NADH-quinone oxidoreductase, chain M/4Family
F [auth M]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
E [auth J]IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
E [auth J]IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
D [auth A]IPR023043NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastidFamily
D [auth A]IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
D [auth A]IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
C [auth L]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
C [auth L]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
C [auth L]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
C [auth L]IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
B [auth K]IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
B [auth K]IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
A [auth H]IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
A [auth H]IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site