9SOB | pdb_00009sob

Structural Model of the Nuclear Pore Complex in Arabidopsis thaliana

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth M]	Nup160	e9sobM1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nup160	ECOD (v295.2)
E [auth M8]	Fusion_gly	e9sobM81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
H [auth M16]	Fusion_gly	e9sobM161	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
N [auth O]	Nup160	e9sobO1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nup160	ECOD (v295.2)
T [auth O16]	Fusion_gly	e9sobO161	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
Q [auth O8]	Fusion_gly	e9sobO81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
W [auth L8]	Fusion_gly	e9sobL81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
X [auth L16]	Fusion_gly	e9sobL161	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
V [auth L]	Nup160	e9sobL1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nup160	ECOD (v295.2)
MA [auth A16]	TatC	e9sobA164	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: TatC	ECOD (v295.2)
SA [auth B]	Nucleoporin_C	e9sobB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nucleoporin_C	ECOD (v295.2)
TA [auth B8]	Fusion_gly	e9sobB81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
WA [auth 48]	Nucleoporin_C	e9sob481	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nucleoporin_C	ECOD (v295.2)
XA [auth E8]	TRI5	e9sobE82	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: Hypothetical protein YqbG-like	F: TRI5	ECOD (v295.2)
AA [auth K16]	Fusion_gly	e9sobK161	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
Y [auth K]	Nup160	e9sobK1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nup160	ECOD (v295.2)
Z [auth K8]	Fusion_gly	e9sobK81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
R [auth Q8]	Fusion_gly	e9sobQ81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
U [auth Q16]	Fusion_gly	e9sobQ161	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
O [auth Q]	Nup160	e9sobQ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nup160	ECOD (v295.2)
M [auth P]	Nup160	e9sobP1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nup160	ECOD (v295.2)
S [auth P16]	Fusion_gly	e9sobP161	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
P [auth P8]	Fusion_gly	e9sobP81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
F [auth N8]	Fusion_gly	e9sobN81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
I [auth N16]	Fusion_gly	e9sobN161	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
C [auth N]	Nup160	e9sobN1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nup160	ECOD (v295.2)
KB [auth D]	Nucleoporin_C	e9sobD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nucleoporin_C	ECOD (v295.2)
LB [auth D8]	Fusion_gly	e9sobD81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
MB [auth D16]	Fusion_gly	e9sobD161	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
NB [auth D24]	Fusion_gly	e9sobD241	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
OB [auth D32]	Fusion_gly	e9sobD321	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
PB [auth D40]	Fusion_gly	e9sobD401	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
CB [auth I8]	Fusion_gly	e9sobI81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
FB [auth I24]	Fusion_gly	e9sobI241	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
ZA [auth I]	Nup160	e9sobI1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nup160	ECOD (v295.2)
IB [auth I16]	Fusion_gly	e9sobI161	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
HA [auth W]	peroxidase	e9sobW1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: peroxidase	ECOD (v295.2)
A [auth R]	Nup160	e9sobR1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Nup160	ECOD (v295.2)
A [auth R]	peroxidase	e9sobR2	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: peroxidase	ECOD (v295.2)
G [auth R16]	Fusion_gly	e9sobR161	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
D [auth R8]	Fusion_gly	e9sobR81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth M], E [auth M8], H [auth M16]	PF12110	Nuclear protein 96 (Nup96)	Nuclear protein 96	Nup96 (often known by the name of its yeast homolog Nup145C) is part of the Nup84 heptameric complex in the nuclear pore complex. Nup96 complexes with Sec13 in the middle of the heptamer. The function of the heptamer is to coat the curvature of the n ...	Nup96 (often known by the name of its yeast homolog Nup145C) is part of the Nup84 heptameric complex in the nuclear pore complex. Nup96 complexes with Sec13 in the middle of the heptamer. The function of the heptamer is to coat the curvature of the nuclear pore complex between the inner and outer nuclear membranes. Nup96 is predicted to be an alpha helical solenoid. The interaction between Nup96 and Sec13 is the point of curvature in the heptameric complex. [1] [2]	Domain
V [auth L], W [auth L8], X [auth L16]	PF04121	Nuclear pore protein 84 / 107 (Nup84_Nup100)	Nuclear pore protein 84 / 107	-	Repeat
BA [auth C16], DA [auth C24], JA [auth C], KA [auth C8], QB [auth C32]	PF11894	Nuclear pore complex scaffold, nucleoporins 186/192/205 (Nup192)	Nuclear pore complex scaffold, nucleoporins 186/192/205	-	Repeat
CA [auth A24], EA [auth A40], MA [auth A16], PA [auth A32]	PF04097	Nup93/Nic96 (Nic96)	Nup93/Nic96	-	Repeat
IA [auth J]	PF05064	Nsp1-like C-terminal region (Nsp1_C)	Nsp1-like C-terminal region	-	Family
UA [auth 4], WA [auth 48]	PF25460	Aladin seven-bladed propeller (Beta-prop_Aladin)	Aladin seven-bladed propeller	-	Repeat
M [auth P], P [auth P8], S [auth P16]	PF07575	Nup85 Nucleoporin (Nucleopor_Nup85)	Nup85 Nucleoporin	-	Repeat
J [auth T], K [auth T8], L [auth T16]	PF13934	Nuclear pore complex assembly (ELYS)	Nuclear pore complex assembly	-	Repeat
C [auth N], F [auth N8], I [auth N16]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], PB [auth D40]	PF03177	Non-repetitive/WGA-negative nucleoporin C-terminal (Nucleoporin_C)	Non-repetitive/WGA-negative nucleoporin C-terminal	-	Repeat
KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], PB [auth D40]	PF08801	Nup133 N terminal like (Nucleoporin_N)	Nup133 N terminal like	-	Repeat
AB [auth J32], DB [auth J8], GB [auth J24], JB [auth J16]	PF05064	Nsp1-like C-terminal region (Nsp1_C)	Nsp1-like C-terminal region	-	Family
BB [auth H8], EB [auth H24], HB [auth H16], YA [auth H]	PF13874	Nucleoporin complex subunit 54 (Nup54)	Nucleoporin complex subunit 54	-	Coiled-coil
HA [auth W]	PF10168	Nuclear pore component (Nup88)	Nuclear pore component	-	Repeat
FA [auth A], RB [auth A48]	PF04097	Nup93/Nic96 (Nic96)	Nup93/Nic96	-	Repeat
A [auth R], D [auth R8], G [auth R16]	PF23347	Nup160 C-terminal TPR (TPR_Nup160_C)	Nup160 C-terminal TPR	-	Repeat
A [auth R], D [auth R8], G [auth R16]	PF23354	NUP160/120 middle TPR (TPR_NUP160_120_M)	NUP160/120 middle TPR	-	Repeat
A [auth R], D [auth R8], G [auth R16]	PF17238	NUP160, helical domain (NUP160_helical_2)	NUP160, helical domain	This entry represents a helical domain that can be found in NUP160, also known as SAR1, a nucleoporin protein in Arabidopsis thaliana. It is a member of the NUP107-160 nuclear pore sub-complex [1]. NUP160 plays a role in normal auxin signalling, whic ...	This entry represents a helical domain that can be found in NUP160, also known as SAR1, a nucleoporin protein in Arabidopsis thaliana. It is a member of the NUP107-160 nuclear pore sub-complex [1]. NUP160 plays a role in normal auxin signalling, which works in synergy with ethylene to control various ethylene-dependent phenomena [2]. Also, it contributes to pathogen defense [3], nucleocytoplasmic mRNA export [2], and is required for disease resistance [4].	Domain
A [auth R], D [auth R8], G [auth R16]	PF11715	Nucleoporin Nup120/160, beta-propeller domain (Beta-prop_Nup120_160)	Nucleoporin Nup120/160, beta-propeller domain	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth M], E [auth M8], H [auth M16]	Nuclear pore complex protein NUP96	wide pore channel activity passive transmembrane transporter activity channel activity porin activity transporter activity transmembrane transporter activity structural molecule activity structural constituent of nuclear pore	response to auxin response to stimulus response to hormone response to endogenous stimulus response to chemical photoperiodism, flowering developmental process response to light stimulus multicellular organismal process reproductive system development reproductive process vegetative to reproductive phase transition of meristem developmental process involved in reproduction multicellular organism development response to auxin response to stimulus response to hormone response to endogenous stimulus response to chemical photoperiodism, flowering developmental process response to light stimulus multicellular organismal process reproductive system development reproductive process vegetative to reproductive phase transition of meristem developmental process involved in reproduction multicellular organism development photoperiodism long-day photoperiodism, flowering anatomical structure development reproductive structure development post-embryonic development response to radiation response to abiotic stimulus long-day photoperiodism system development cellular response to stimulus regulation of defense response positive regulation of response to biotic stimulus regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms regulation of cellular process regulation of response to external stimulus signaling positive regulation of biological process response to biotic stimulus cell communication positive regulation of response to stimulus immune response-activating signaling pathway positive regulation of response to external stimulus immune response-regulating signaling pathway positive regulation of immune response regulation of response to stress response to stress innate immune response regulation of immune system process response to external biotic stimulus signal transduction positive regulation of immune system process innate immune response-activating signaling pathway regulation of biological process positive regulation of innate immune response defense response immune response response to other organism regulation of innate immune response biological regulation defense response to symbiont response to external stimulus regulation of response to stimulus immune system process defense response to other organism positive regulation of defense response activation of innate immune response regulation of immune response cellular process activation of immune response	membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane membrane organelle membrane protein-containing complex membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane membrane organelle membrane protein-containing complex nuclear protein-containing complex nuclear pore
N [auth O], Q [auth O8], T [auth O16]	Protein SEH1	structural molecule activity	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction regulation of TORC1 signaling positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication cellular process TORC1 signaling positive regulation of signaling response to nutrient levels cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation response to starvation	protein-containing complex Seh1-associated complex membrane-bounded organelle intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope protein-containing complex Seh1-associated complex membrane-bounded organelle intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore cytoplasm plastid chloroplast
V [auth L], W [auth L8], X [auth L16]	Nuclear pore complex protein NUP107	structural molecule activity structural constituent of nuclear pore	cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport nitrogen compound transport mRNA transport mRNA export from nucleus RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport gene expression macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process metabolic process macromolecule metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore
BA [auth C16], DA [auth C24], JA [auth C], KA [auth C8], QB [auth C32]	Nuclear pore complex protein NUP205	-	biological process involved in interspecies interaction between organisms response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus induced systemic resistance response to biotic stimulus defense response to bacterium immune system process defense response to other organism response to stress response to bacterium innate immune response biological process involved in interspecies interaction between organisms response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus induced systemic resistance response to biotic stimulus defense response to bacterium immune system process defense response to other organism response to stress response to bacterium innate immune response response to external biotic stimulus cellular response to stimulus regulation of cellular process signaling response to salicylic acid cell communication signal transduction salicylic acid mediated signaling pathway cellular response to salicylic acid stimulus systemic acquired resistance regulation of biological process biological regulation response to oxygen-containing compound systemic acquired resistance, salicylic acid mediated signaling pathway cellular response to oxygen-containing compound cellular response to chemical stimulus response to chemical cellular process regulation of biosynthetic process rhythmic process circadian regulation of gene expression circadian rhythm regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore
CA [auth A24], EA [auth A40], MA [auth A16], PA [auth A32]	Nuclear pore complex protein NUP93A	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cell-cell junction symplast anchoring junction cell junction plasmodesma protein-containing complex nuclear protein-containing complex endomembrane system organelle envelope nuclear envelope nuclear pore
IA [auth J]	Nuclear pore complex protein NUP62	binding phospholipid binding lipid binding structural molecule activity structural constituent of nuclear pore	cellular response to stimulus auxin-activated signaling pathway regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of biological process regulation of signal transduction hormone-mediated signaling pathway negative regulation of cell communication cellular response to auxin stimulus cell communication response to auxin cellular response to endogenous stimulus response to hormone cellular response to stimulus auxin-activated signaling pathway regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of biological process regulation of signal transduction hormone-mediated signaling pathway negative regulation of cell communication cellular response to auxin stimulus cell communication response to auxin cellular response to endogenous stimulus response to hormone negative regulation of cellular process signal transduction cellular response to hormone stimulus regulation of signaling regulation of biological process negative regulation of response to stimulus regulation of auxin mediated signaling pathway response to endogenous stimulus biological regulation negative regulation of signal transduction cellular response to chemical stimulus negative regulation of auxin mediated signaling pathway regulation of response to stimulus response to chemical regulation of cell communication cellular process establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport RNA export from nucleus establishment of RNA localization RNA localization nuclear export nucleobase-containing compound transport	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle nuclear periphery nuclear lumen cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle nuclear periphery nuclear lumen organelle envelope nuclear envelope endomembrane system plastid chloroplast protein-containing complex nuclear protein-containing complex nuclear pore nuclear pore central transport channel
LA [auth A8]	Nuclear pore complex protein NUP93A	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cell-cell junction symplast anchoring junction cell junction plasmodesma protein-containing complex nuclear protein-containing complex endomembrane system organelle envelope nuclear envelope nuclear pore
NA [auth F8], OA [auth F], QA [auth F24], RA [auth F16]	Nuclear pore complex protein NUP35	binding nucleic acid binding phospholipid binding lipid binding structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis establishment of protein localization cellular localization NLS-bearing protein import into nucleus nucleocytoplasmic transport transport nuclear transport intracellular transport cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis establishment of protein localization cellular localization NLS-bearing protein import into nucleus nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane protein-containing complex membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane protein-containing complex nuclear protein-containing complex nuclear pore nuclear pore central transport channel nuclear pore nuclear basket
SA [auth B], TA [auth B8]	Nucleoporin (DUF3414)	structural molecule activity structural constituent of nuclear pore	establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus cellular process intracellular protein localization intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport RNA export from nucleus establishment of RNA localization RNA localization nuclear export nucleobase-containing compound transport	nuclear pore inner ring membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore
UA [auth 4], WA [auth 48]	Aladin	-	localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport cellular process establishment of localization	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore endoplasmic reticulum membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore endoplasmic reticulum cytoplasm
VA [auth E], XA [auth E8]	Nucleoporin protein Ndc1-Nup protein	protein-macromolecule adaptor activity molecular adaptor activity	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle nuclear pore transmembrane ring endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle nuclear pore transmembrane ring endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore nuclear membrane membrane organelle membrane
AA [auth K16], Y [auth K], Z [auth K8]	Nuclear pore complex protein NUP133	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport cellular component organization organelle organization chromosome organization cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore
O [auth Q], R [auth Q8], U [auth Q16]	Nuclear pore complex protein NUP43	-	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore
M [auth P], P [auth P8], S [auth P16]	Nuclear pore complex protein NUP85	structural molecule activity structural constituent of nuclear pore	response to abscisic acid response to stimulus response to lipid response to hormone response to alcohol response to chemical response to endogenous stimulus response to oxygen-containing compound establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport response to abscisic acid response to stimulus response to lipid response to hormone response to alcohol response to chemical response to endogenous stimulus response to oxygen-containing compound establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus cellular process intracellular protein localization intracellular protein transport nitrogen compound transport mRNA transport mRNA export from nucleus RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport gene expression macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process metabolic process macromolecule metabolic process regulation of cellular process positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex nuclear pore outer ring intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore
J [auth T], K [auth T8], L [auth T16]	E3 ubiquitin-protein ligase HOS1	aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity transferase activity catalytic activity ubiquitin-protein transferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity	regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process developmental process multicellular organismal process reproductive system development reproductive process vegetative to reproductive phase transition of meristem developmental process involved in reproduction multicellular organism development anatomical structure development reproductive structure development post-embryonic development system development protein ubiquitination macromolecule modification protein metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal response to stimulus response to stress response to abiotic stimulus response to cold response to temperature stimulus	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
C [auth N], F [auth N8], I [auth N16]	Protein transport protein SEC13 homolog B	structural molecule activity	membrane organization vesicle budding from membrane cellular localization transport intracellular transport endoplasmic reticulum to Golgi vesicle-mediated transport establishment of localization vesicle-mediated transport cellular component organization vesicle organization localization organelle organization establishment of localization in cell cellular process membrane organization vesicle budding from membrane cellular localization transport intracellular transport endoplasmic reticulum to Golgi vesicle-mediated transport establishment of localization vesicle-mediated transport cellular component organization vesicle organization localization organelle organization establishment of localization in cell cellular process cellular component organization or biogenesis COPII-coated vesicle budding Golgi vesicle transport establishment of protein localization nucleocytoplasmic transport nuclear transport protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen protein-containing complex nuclear protein-containing complex nuclear pore outer ring endomembrane system organelle envelope nuclear envelope nuclear pore Golgi apparatus cytoplasm vesicle coat intracellular vesicle transport vesicle membrane membrane protein complex membrane coat bounding membrane of organelle vesicle membrane cytoplasmic vesicle ER to Golgi transport vesicle membrane coated vesicle vesicle transport vesicle membrane coated membrane COPII vesicle coat cytoplasmic vesicle membrane coated vesicle membrane COPII-coated ER to Golgi transport vesicle organelle membrane endoplasmic reticulum
KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], PB [auth D40]	Nuclear pore complex protein NUP155	structural molecule activity structural constituent of nuclear pore	cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport establishment of localization cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery localization cellular localization nucleocytoplasmic transport transport nuclear transport establishment of localization in cell intracellular transport establishment of localization protein localization to nucleus localization within membrane protein localization to membrane protein localization to nuclear envelope protein localization to organelle macromolecule localization intracellular protein localization protein localization to nuclear inner membrane establishment of protein localization import into nucleus establishment of protein localization to organelle protein transport protein import into nucleus intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport RNA export from nucleus establishment of RNA localization RNA localization nuclear export nucleobase-containing compound transport	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen nuclear pore inner ring protein-containing complex nuclear protein-containing complex endomembrane system organelle envelope nuclear envelope nuclear pore cell periphery plasma membrane membrane cell-cell junction symplast anchoring junction cell junction plasmodesma
AB [auth J32], DB [auth J8], GB [auth J24], JB [auth J16]	Nuclear pore complex protein NUP62	binding phospholipid binding lipid binding structural molecule activity structural constituent of nuclear pore	cellular response to stimulus auxin-activated signaling pathway regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of biological process regulation of signal transduction hormone-mediated signaling pathway negative regulation of cell communication cellular response to auxin stimulus cell communication response to auxin cellular response to endogenous stimulus response to hormone cellular response to stimulus auxin-activated signaling pathway regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of biological process regulation of signal transduction hormone-mediated signaling pathway negative regulation of cell communication cellular response to auxin stimulus cell communication response to auxin cellular response to endogenous stimulus response to hormone negative regulation of cellular process signal transduction cellular response to hormone stimulus regulation of signaling regulation of biological process negative regulation of response to stimulus regulation of auxin mediated signaling pathway response to endogenous stimulus biological regulation negative regulation of signal transduction cellular response to chemical stimulus negative regulation of auxin mediated signaling pathway regulation of response to stimulus response to chemical regulation of cell communication cellular process establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport RNA export from nucleus establishment of RNA localization RNA localization nuclear export nucleobase-containing compound transport	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle nuclear periphery nuclear lumen cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle nuclear periphery nuclear lumen organelle envelope nuclear envelope endomembrane system plastid chloroplast protein-containing complex nuclear protein-containing complex nuclear pore nuclear pore central transport channel
CB [auth I8], FB [auth I24], IB [auth I16], ZA [auth I]	NUP58	structural molecule activity structural constituent of nuclear pore	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore
BB [auth H8], EB [auth H24], HB [auth H16], YA [auth H]	Nuclear pore complex protein NUP54	structural molecule activity structural constituent of nuclear pore	cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis cellular localization protein localization to nucleus localization within membrane protein localization to membrane protein localization to nuclear envelope localization protein localization to organelle cellular component organization nucleus organization organelle organization nuclear pore organization protein-containing complex organization cellular process cellular component organization or biogenesis cellular localization protein localization to nucleus localization within membrane protein localization to membrane protein localization to nuclear envelope localization protein localization to organelle macromolecule localization intracellular protein localization protein localization to nuclear inner membrane establishment of protein localization NLS-bearing protein import into nucleus nucleocytoplasmic transport transport nuclear transport intracellular transport establishment of localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell protein import into nucleus intracellular protein transport	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen organelle envelope nuclear envelope endomembrane system plastid cytoplasm chloroplast protein-containing complex nuclear protein-containing complex nuclear pore nuclear pore central transport channel
HA [auth W]	Nuclear pore complex protein NUP88	structural molecule activity structural constituent of nuclear pore	establishment of organelle localization cellular localization ribonucleoprotein complex biogenesis nucleocytoplasmic transport transport nuclear transport ribosomal subunit export from nucleus intracellular transport establishment of localization cellular component biogenesis localization ribosome biogenesis ribosomal small subunit export from nucleus organelle localization establishment of localization in cell establishment of organelle localization cellular localization ribonucleoprotein complex biogenesis nucleocytoplasmic transport transport nuclear transport ribosomal subunit export from nucleus intracellular transport establishment of localization cellular component biogenesis localization ribosome biogenesis ribosomal small subunit export from nucleus organelle localization establishment of localization in cell cellular process cellular component organization or biogenesis nuclear export ribosome localization establishment of protein localization protein export from nucleus protein transport macromolecule localization intracellular protein localization intracellular protein transport nitrogen compound transport mRNA transport mRNA export from nucleus RNA localization nucleobase-containing compound transport RNA transport nucleic acid transport gene expression macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process metabolic process macromolecule metabolic process biological process involved in interspecies interaction between organisms response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus immune system process defense response to other organism response to stress innate immune response response to external biotic stimulus ribosomal large subunit export from nucleus protein localization to nucleus import into nucleus establishment of protein localization to organelle protein localization to organelle protein import into nucleus systemic acquired resistance	membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system protein-containing complex nuclear protein-containing complex nuclear pore
GA [auth V]	Nuclear pore complex protein NUP214	structural molecule activity structural constituent of nuclear pore	developmental process multicellular organismal process reproductive system development reproductive process plant gross anatomical part developmental process developmental process involved in reproduction multicellular organism development fruit development embryo development ending in seed dormancy seed development anatomical structure development reproductive structure development post-embryonic development system development developmental process multicellular organismal process reproductive system development reproductive process plant gross anatomical part developmental process developmental process involved in reproduction multicellular organism development fruit development embryo development ending in seed dormancy seed development anatomical structure development reproductive structure development post-embryonic development system development zygote asymmetric cell division cellular process cell division asymmetric cell division cellular localization RNA transport nitrogen compound transport nucleocytoplasmic transport transport nuclear transport nucleic acid transport intracellular transport establishment of localization RNA export from nucleus localization establishment of RNA localization establishment of localization in cell macromolecule localization RNA localization nuclear export nucleobase-containing compound transport	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex endomembrane system organelle envelope nuclear envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex nucleus nuclear protein-containing complex endomembrane system organelle envelope nuclear envelope nuclear pore
FA [auth A], RB [auth A48]	Nuclear pore complex protein NUP93A	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process establishment of protein localization protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cell-cell junction symplast anchoring junction cell junction plasmodesma protein-containing complex nuclear protein-containing complex endomembrane system organelle envelope nuclear envelope nuclear pore
A [auth R], D [auth R8], G [auth R16]	Nuclear pore complex protein NUP160	structural molecule activity structural constituent of nuclear pore	cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport poly(A)+ mRNA export from nucleus intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process developmental process response to stimulus response to stress response to abiotic stimulus response to cold response to temperature stimulus response to auxin response to hormone response to endogenous stimulus response to chemical regulation of timing of meristematic phase transition regulation of biological process regulation of development, heterochronic regulation of meristem development regulation of developmental process biological regulation plant gross anatomical part developmental process regulation of timing of transition from vegetative to reproductive phase meristem development anatomical structure development	membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane membrane organelle membrane protein-containing complex membrane-bounded organelle intracellular organelle organelle envelope cellular anatomical structure intracellular anatomical structure organelle nuclear envelope nucleus intracellular membrane-bounded organelle endomembrane system nuclear membrane membrane organelle membrane protein-containing complex nuclear protein-containing complex nuclear pore

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth M], E [auth M8], H [auth M16]	IPR037665	Nucleoporin peptidase S59-like	Family
B [auth M], E [auth M8], H [auth M16]	IPR036903	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily	Homologous Superfamily
B [auth M], E [auth M8], H [auth M16]	IPR007230	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain	Domain
B [auth M], E [auth M8], H [auth M16]	IPR021967	Nuclear pore complex protein NUP96, C-terminal domain	Domain
N [auth O], Q [auth O8], T [auth O16]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
N [auth O], Q [auth O8], T [auth O16]	IPR037363	Sec13/Seh1 family	Family
N [auth O], Q [auth O8], T [auth O16]	IPR001680	WD40 repeat	Repeat
N [auth O], Q [auth O8], T [auth O16]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
V [auth L], W [auth L8], X [auth L16]	IPR007252	Nuclear pore protein 84/107	Family
BA [auth C16], DA [auth C24], JA [auth C], KA [auth C8], QB [auth C32]	IPR021827	Nucleoporin Nup186/Nup192/Nup205	Family
CA [auth A24], EA [auth A40], MA [auth A16], PA [auth A32]	IPR007231	Nucleoporin interacting component Nup93/Nic96	Family
IA [auth J]	IPR007758	Nucleoporin, NSP1-like, C-terminal	Domain
IA [auth J]	IPR026010	Nucleoporin NSP1/NUP62	Family
LA [auth A8]	IPR007231	Nucleoporin interacting component Nup93/Nic96	Family
NA [auth F8], OA [auth F], QA [auth F24], RA [auth F16]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
NA [auth F8], OA [auth F], QA [auth F24], RA [auth F16]	IPR017389	Nucleoporin, NUP53	Family
NA [auth F8], OA [auth F], QA [auth F24], RA [auth F16]	IPR007846	RNA-recognition motif (RRM) Nup35-type domain	Domain
NA [auth F8], OA [auth F], QA [auth F24], RA [auth F16]	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
SA [auth B], TA [auth B8]	IPR044840	Nucleoporin Nup188	Family
UA [auth 4], WA [auth 48]	IPR045139	Aladin	Family
UA [auth 4], WA [auth 48]	IPR001680	WD40 repeat	Repeat
UA [auth 4], WA [auth 48]	IPR057403	Aladin, seven-bladed propeller	Domain
UA [auth 4], WA [auth 48]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
VA [auth E], XA [auth E8]	IPR019049	Nucleoporin protein Ndc1-Nup	Family
AA [auth K16], Y [auth K], Z [auth K8]	IPR014908	Nucleoporin, Nup133/Nup155-like, N-terminal	Domain
AA [auth K16], Y [auth K], Z [auth K8]	IPR037624	Nuclear pore complex protein Nup133-like	Family
AA [auth K16], Y [auth K], Z [auth K8]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
AA [auth K16], Y [auth K], Z [auth K8]	IPR007187	Nucleoporin, Nup133/Nup155-like, C-terminal	Domain
O [auth Q], R [auth Q8], U [auth Q16]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
M [auth P], P [auth P8], S [auth P16]	IPR011502	Nucleoporin Nup85-like	Family
J [auth T], K [auth T8], L [auth T16]	IPR044718	E3 ubiquitin-protein ligase HOS1	Family
J [auth T], K [auth T8], L [auth T16]	IPR025151	ELYS-like domain	Domain
J [auth T], K [auth T8], L [auth T16]	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
C [auth N], F [auth N8], I [auth N16]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
C [auth N], F [auth N8], I [auth N16]	IPR037363	Sec13/Seh1 family	Family
C [auth N], F [auth N8], I [auth N16]	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
C [auth N], F [auth N8], I [auth N16]	IPR001680	WD40 repeat	Repeat
C [auth N], F [auth N8], I [auth N16]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], PB [auth D40]	IPR042537	Nucleoporin, Nup155-like, C-terminal, subdomain 2	Homologous Superfamily
KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], PB [auth D40]	IPR042533	Nucleoporin, Nup155-like, C-terminal, subdomain 1	Homologous Superfamily
KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], PB [auth D40]	IPR042538	Nucleoporin, Nup155-like, C-terminal, subdomain 3	Homologous Superfamily
KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], PB [auth D40]	IPR014908	Nucleoporin, Nup133/Nup155-like, N-terminal	Domain
KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], PB [auth D40]	IPR004870	Nucleoporin, Nup155-like	Family
KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], KB [auth D], LB [auth D8], MB [auth D16], NB [auth D24], OB [auth D32], PB [auth D40]	IPR007187	Nucleoporin, Nup133/Nup155-like, C-terminal	Domain
AB [auth J32], DB [auth J8], GB [auth J24], JB [auth J16]	IPR007758	Nucleoporin, NSP1-like, C-terminal	Domain
AB [auth J32], DB [auth J8], GB [auth J24], JB [auth J16]	IPR026010	Nucleoporin NSP1/NUP62	Family
CB [auth I8], FB [auth I24], IB [auth I16], ZA [auth I]	IPR024882	Nucleoporin p58/p45/NUP49	Family
CB [auth I8], FB [auth I24], IB [auth I16], ZA [auth I]	IPR064074	NUP58, middle domain	Domain
BB [auth H8], EB [auth H24], HB [auth H16], YA [auth H]	IPR025712	Nucleoporin Nup54, alpha-helical domain	Domain
BB [auth H8], EB [auth H24], HB [auth H16], YA [auth H]	IPR024864	Nucleoporin Nup54/Nup57/Nup44	Family
HA [auth W]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
HA [auth W]	IPR037700	Nucleoporin NUP88/NUP82	Family
GA [auth V]	IPR044694	Nuclear pore complex protein NUP214	Family
FA [auth A], RB [auth A48]	IPR007231	Nucleoporin interacting component Nup93/Nic96	Family
A [auth R], D [auth R8], G [auth R16]	IPR035192	NUP160, helical domain, plants	Domain
A [auth R], D [auth R8], G [auth R16]	IPR021717	Nucleoporin Nup120/160	Family
A [auth R], D [auth R8], G [auth R16]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A [auth R], D [auth R8], G [auth R16]	IPR056535	NUP160, middle TPR domain	Domain
A [auth R], D [auth R8], G [auth R16]	IPR059141	Nucleoporin Nup120/160, beta-propeller domain	Domain
A [auth R], D [auth R8], G [auth R16]	IPR056536	NUP160, C-terminal TPR domain	Domain