9SDP | pdb_00009sdp

Cryo-EM structure of the Arabidopsis thaliana 40S ribosomal subunit


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 9]18S RNA---
B [auth BA]Small ribosomal subunit protein uS2y
C [auth BB]Small ribosomal subunit protein eS1z
D [auth BC]Small ribosomal subunit protein uS5w
E [auth BE]Small ribosomal subunit protein eS4z
F [auth BG]Small ribosomal subunit protein eS6y
G [auth BH]Small ribosomal subunit protein eS7z
H [auth BI]Small ribosomal subunit protein eS8z
I [auth BJ]Small ribosomal subunit protein uS4y
J [auth BL]Small ribosomal subunit protein uS17z
K [auth BN]Small ribosomal subunit protein uS15y
L [auth cS]Small ribosomal subunit protein uS11x
M [auth BV]Small ribosomal subunit protein eS21z
N [auth BW]Small ribosomal subunit protein uS8z/uS8w
O [auth BX]Small ribosomal subunit protein uS12y
P [auth BY]Small ribosomal subunit protein eS24z
Q [auth BZ]Small ribosomal subunit protein eS26x
R [auth Bb]Small ribosomal subunit protein eS27y
S [auth Be]Small ribosomal subunit protein eS30z/eS30y/eS30x
T [auth Cn]Small ribosomal subunit protein eS32 eS32z/eS32y/eS32x/eS32w/eS32v

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth BA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth BA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth BA]IPR001865Small ribosomal subunit protein uS2Family
B [auth BA]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
B [auth BA]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
C [auth BB]IPR001593Small ribosomal subunit protein eS1Family
C [auth BB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
C [auth BB]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
D [auth BC]IPR000851Small ribosomal subunit protein uS5Family
D [auth BC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
D [auth BC]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
D [auth BC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
D [auth BC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
D [auth BC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
D [auth BC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
E [auth BE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
E [auth BE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
E [auth BE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
E [auth BE]IPR002942RNA-binding S4 domainDomain
E [auth BE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
E [auth BE]IPR000876Small ribosomal subunit protein eS4Family
E [auth BE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth BE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
E [auth BE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
E [auth BE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
E [auth BE]IPR005824KOWDomain
F [auth BG]IPR014401Small ribosomal subunit protein eS6-likeFamily
F [auth BG]IPR001377Small ribosomal subunit protein eS6Family
F [auth BG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
G [auth BH]IPR000554Small ribosomal subunit protein eS7Family
G [auth BH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
H [auth BI]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
H [auth BI]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
H [auth BI]IPR001047Small ribosomal subunit protein eS8Family
H [auth BI]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotaHomologous Superfamily
I [auth BJ]IPR002942RNA-binding S4 domainDomain
I [auth BJ]IPR022801Small ribosomal subunit protein uS4Family
I [auth BJ]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
I [auth BJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
I [auth BJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
I [auth BJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
J [auth BL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
J [auth BL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
J [auth BL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
J [auth BL]IPR000266Small ribosomal subunit protein uS17Family
J [auth BL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
K [auth BN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
K [auth BN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
K [auth BN]IPR000589Small ribosomal subunit protein uS15Family
K [auth BN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
L [auth cS]IPR001971Small ribosomal subunit protein uS11Family
L [auth cS]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
L [auth cS]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
M [auth BV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
M [auth BV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
M [auth BV]IPR001931Small ribosomal subunit protein eS21Family
N [auth BW]IPR000630Small ribosomal subunit protein uS8Family
N [auth BW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
N [auth BW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
O [auth BX]IPR006032Small ribosomal subunit protein uS12Family
O [auth BX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
O [auth BX]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
P [auth BY]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
P [auth BY]IPR001976Small ribosomal subunit protein eS24Family
P [auth BY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth BY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
Q [auth BZ]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
Q [auth BZ]IPR000892Small ribosomal subunit protein eS26Family
Q [auth BZ]IPR047864Ribosomal protein eS26, conserved siteConserved Site
R [auth Bb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
R [auth Bb]IPR000592Small ribosomal subunit protein eS27Family
R [auth Bb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
S [auth Be]IPR006846Small ribosomal subunit protein eS30Family
T [auth Cn]IPR007836Large ribosomal subunit protein eS32Family