9RT2 | pdb_00009rt2

NetF - ANTXR2 structure (C4)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
K [auth C4]	SCOP2B Superfamily	vWA-like	8041588	3000832	SCOP2B (2022-06-29)
H [auth C3]	SCOP2B Superfamily	vWA-like	8041588	3000832	SCOP2B (2022-06-29)
E [auth C2]	SCOP2B Superfamily	vWA-like	8041588	3000832	SCOP2B (2022-06-29)
B [auth C1]	SCOP2B Superfamily	vWA-like	8041588	3000832	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth C1]	VWA	e9rt2C11	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: VWA	ECOD (v295.2)
B [auth C1]	pRN1_helical	e9rt2C12	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: pRN1_helical	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth C1], E [auth C2], H [auth C3], K [auth C4]	PF00092	von Willebrand factor type A domain (VWA)	von Willebrand factor type A domain		Domain
B [auth C1], E [auth C2], H [auth C3], K [auth C4]	PF05587	Anthrax receptor extracellular domain (Anth_Ig)	Anthrax receptor extracellular domain	This region is found in the putatively extracellular N-terminal half of the anthrax receptor. It is probably part of the Ig superfamily and most closely related to Pfam:PF01833 (personal obs: C Yeats).	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth C1], E [auth C2], H [auth C3], K [auth C4]	Anthrax toxin receptor 2	cation binding ion binding binding metal ion binding small molecule binding molecular transducer activity transmembrane signaling receptor activity signaling receptor activity	-	cell periphery cellular anatomical structure cell surface membrane plasma membrane external side of plasma membrane side of membrane extracellular region endosome membrane membrane-bounded organelle intracellular anatomical structure endosome intracellular vesicle intracellular membrane-bounded organelle cell periphery cellular anatomical structure cell surface membrane plasma membrane external side of plasma membrane side of membrane extracellular region endosome membrane membrane-bounded organelle intracellular anatomical structure endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle organelle cytoplasm vesicle organelle membrane organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum endoplasmic reticulum membrane
A [auth N1], C [auth N2], D [auth N3], F [auth N4], G [auth N5], A [auth N1], C [auth N2], D [auth N3], F [auth N4], G [auth N5], I [auth N6], J [auth N7], L [auth N8]	Leukocidin/Hemolysin toxin family	-	biological process involved in interspecies interaction between organisms cytolysis in another organism cellular process disruption of cell in another organism disruption of anatomical structure in another organism cytolysis killing of cells of another organism cell killing	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth C1], E [auth C2], H [auth C3], K [auth C4]	IPR036465	von Willebrand factor A-like domain superfamily	Homologous Superfamily
B [auth C1], E [auth C2], H [auth C3], K [auth C4]	IPR008400	Anthrax toxin receptor, extracellular domain	Domain
B [auth C1], E [auth C2], H [auth C3], K [auth C4]	IPR008399	Anthrax toxin receptor, C-terminal	Domain
B [auth C1], E [auth C2], H [auth C3], K [auth C4]	IPR002035	von Willebrand factor, type A	Domain
B [auth C1], E [auth C2], H [auth C3], K [auth C4]	IPR017360	Anthrax toxin receptor	Family
A [auth N1], C [auth N2], D [auth N3], F [auth N4], G [auth N5], A [auth N1], C [auth N2], D [auth N3], F [auth N4], G [auth N5], I [auth N6], J [auth N7], L [auth N8]	IPR016183	Leukocidin/Hemolysin toxin	Domain
A [auth N1], C [auth N2], D [auth N3], F [auth N4], G [auth N5], A [auth N1], C [auth N2], D [auth N3], F [auth N4], G [auth N5], I [auth N6], J [auth N7], L [auth N8]	IPR036435	Leukocidin/porin MspA superfamily	Homologous Superfamily
A [auth N1], C [auth N2], D [auth N3], F [auth N4], G [auth N5], A [auth N1], C [auth N2], D [auth N3], F [auth N4], G [auth N5], I [auth N6], J [auth N7], L [auth N8]	IPR003963	Bi-component toxin, staphylococci	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B [auth C1], E [auth C2], H [auth C3], K [auth C4]	: P58335	hyaline fibromatosis syndrome ankylosing spondylitis fibroma gingival hypertrophy contracture prostate cancer osteoporosis juvenile hyaline fibromatosis Lytic lesion malignant glioma myopathy adrenal cortex carcinoma ovarian cancer astrocytic tumor pilocytic astrocytoma hyaline fibromatosis syndrome ankylosing spondylitis fibroma gingival hypertrophy contracture prostate cancer osteoporosis juvenile hyaline fibromatosis Lytic lesion malignant glioma myopathy adrenal cortex carcinoma ovarian cancer astrocytic tumor pilocytic astrocytoma breast fibroadenoma primitive neuroectodermal tumor ductal breast carcinoma in situ psoriasis gastric carcinoma head and neck cancer invasive ductal breast carcinoma large cell medulloblastoma lytic metastatic bone lesion malignant pancreatic neoplasm pancreatic ductal adenocarcinoma atypical teratoid rhabdoid tumor pituitary cancer Sjogren syndrome juvenile dermatomyositis lung carcinoma malignant ependymoma medulloblastoma osteosarcoma arthrogryposis pancreatic intraductal papillary-mucinous neoplasm breast carcinoma cystic fibrosis fibromatosis tuberculosis glioblastoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.