9QG7 | pdb_00009qg7

In situ structure of the Vaccinia virus (WR) portal complex in mature virions

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, EA [auth e], K, OA [auth o], U, A, EA [auth e], K, OA [auth o], U, YA [auth y]	PF03395	Poxvirus P4A protein (Pox_P4A)	Poxvirus P4A protein	-	Family
A, EA [auth e], K, OA [auth o], U, A, EA [auth e], K, OA [auth o], U, YA [auth y]	PF03394	Poxvirus E8 protein (Pox_E8)	Poxvirus E8 protein	-	Family
B, FA [auth f], L, PA [auth p], V, B, FA [auth f], L, PA [auth p], V, ZA [auth z]	PF04656	Pox virus E6 protein (Pox_E6)	Pox virus E6 protein	-	Family
AB [auth 1], BB [auth 2], C, D, GA [auth g], AB [auth 1], BB [auth 2], C, D, GA [auth g], HA [auth h], M, N, QA [auth q], RA [auth r], W, X	PF03339	Poxvirus L3/FP4 protein (Pox_L3_FP4)	Poxvirus L3/FP4 protein	-	Family
AA [auth a], CA [auth c], CB [auth 3], E, EB [auth 5], AA [auth a], CA [auth c], CB [auth 3], E, EB [auth 5], G, GB [auth 7], I, IA [auth i], KA [auth k], MA [auth m], O, Q, S, SA [auth s], UA [auth u], WA [auth w], Y	PF03395	Poxvirus P4A protein (Pox_P4A)	Poxvirus P4A protein	-	Family
AA [auth a], CA [auth c], CB [auth 3], E, EB [auth 5], AA [auth a], CA [auth c], CB [auth 3], E, EB [auth 5], G, GB [auth 7], I, IA [auth i], KA [auth k], MA [auth m], O, Q, S, SA [auth s], UA [auth u], WA [auth w], Y	PF03394	Poxvirus E8 protein (Pox_E8)	Poxvirus E8 protein	-	Family
BA [auth b], DA [auth d], DB [auth 4], F, FB [auth 6], BA [auth b], DA [auth d], DB [auth 4], F, FB [auth 6], H, HB [auth 8], J, JA [auth j], LA [auth l], NA [auth n], P, R, T, TA [auth t], VA [auth v], XA [auth x], Z	PF03339	Poxvirus L3/FP4 protein (Pox_L3_FP4)	Poxvirus L3/FP4 protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, EA [auth e], K, OA [auth o], U, A, EA [auth e], K, OA [auth o], U, YA [auth y]	Portal protein E8	-	-	host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane other organism part host cell cytoplasm part host intracellular organelle cellular anatomical structure host cell cytoplasm host cell part host cell endomembrane system host intracellular region host cell endoplasmic reticulum membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane other organism part host cell cytoplasm part host intracellular organelle cellular anatomical structure host cell cytoplasm host cell part host cell endomembrane system host intracellular region host cell endoplasmic reticulum membrane virion component
B, FA [auth f], L, PA [auth p], V, B, FA [auth f], L, PA [auth p], V, ZA [auth z]	Portal Protein E6	-	virion assembly viral process viral life cycle	virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part
AB [auth 1], BB [auth 2], C, D, GA [auth g], AB [auth 1], BB [auth 2], C, D, GA [auth g], HA [auth h], M, N, QA [auth q], RA [auth r], W, X	Portal Protein L3	-	-	virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part
AA [auth a], CA [auth c], CB [auth 3], E, EB [auth 5], AA [auth a], CA [auth c], CB [auth 3], E, EB [auth 5], G, GB [auth 7], I, IA [auth i], KA [auth k], MA [auth m], O, Q, S, SA [auth s], UA [auth u], WA [auth w], Y	Core protein A10	structural molecule activity	-	virion component
BA [auth b], DA [auth d], DB [auth 4], F, FB [auth 6], BA [auth b], DA [auth d], DB [auth 4], F, FB [auth 6], H, HB [auth 8], J, JA [auth j], LA [auth l], NA [auth n], P, R, T, TA [auth t], VA [auth v], XA [auth x], Z	Core protein A4	-	-	host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane other organism part host cell cytoplasm part host intracellular organelle host cell endoplasmic reticulum-Golgi intermediate compartment membrane host cell endoplasmic reticulum-Golgi intermediate compartment cellular anatomical structure host cell cytoplasm host cell part host intracellular region virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, EA [auth e], K, OA [auth o], U, A, EA [auth e], K, OA [auth o], U, YA [auth y]	IPR005057	Poxvirus E8	Family
B, FA [auth f], L, PA [auth p], V, B, FA [auth f], L, PA [auth p], V, ZA [auth z]	IPR006749	Pox virus E6 protein	Family
AB [auth 1], BB [auth 2], C, D, GA [auth g], AB [auth 1], BB [auth 2], C, D, GA [auth g], HA [auth h], M, N, QA [auth q], RA [auth r], W, X	IPR005007	Poxvirus L3/FP4	Family
AA [auth a], CA [auth c], CB [auth 3], E, EB [auth 5], AA [auth a], CA [auth c], CB [auth 3], E, EB [auth 5], G, GB [auth 7], I, IA [auth i], KA [auth k], MA [auth m], O, Q, S, SA [auth s], UA [auth u], WA [auth w], Y	IPR005058	Poxvirus P4A	Family
BA [auth b], DA [auth d], DB [auth 4], F, FB [auth 6], BA [auth b], DA [auth d], DB [auth 4], F, FB [auth 6], H, HB [auth 8], J, JA [auth j], LA [auth l], NA [auth n], P, R, T, TA [auth t], VA [auth v], XA [auth x], Z	IPR010396	Poxvirus A4L	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.