Structure of eIF2B decamer bound to (P)eIF2 alpha and Compound A-(S)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| K | SCOP2B Superfamily | Nucleic acid-binding proteins | 8042151 | 3000135 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | NagB/RpiA/CoA transferase-like | 8101599 | 3000693 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | NagB/RpiA/CoA transferase-like | 8101599 | 3000693 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| J | ClpB_D2-small | e9qc6J1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: ClpB_D2-small | ECOD (v295.2) |
| I | Crp | e9qc6I1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Crp | ECOD (v295.2) |
| F | ClpB_D2-small | e9qc6F1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: ClpB_D2-small | ECOD (v295.2) |
| E | GMPPB_C | e9qc6E1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: GMPPB_C | ECOD (v295.2) |
| D | GMPPB_C | e9qc6D1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: GMPPB_C | ECOD (v295.2) |
| C | ClpB_D2-small | e9qc6C1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: ClpB_D2-small | ECOD (v295.2) |
| B | GMPPB_C | e9qc6B1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: GMPPB_C | ECOD (v295.2) |
| A | ClpB_D2-small | e9qc6A1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: ClpB_D2-small | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF07541 | Eukaryotic translation initiation factor 2 alpha subunit (EIF_2_alpha) | Eukaryotic translation initiation factor 2 alpha subunit | - | Family | |
| PF00575 | S1 RNA binding domain (S1) | S1 RNA binding domain | The S1 domain occurs in a wide range of RNA associated proteins. It is structurally similar to cold shock protein which binds nucleic acids. The S1 domain has an OB-fold structure. | Domain | |
| PF01008 | Initiation factor 2 subunit family (IF-2B) | Initiation factor 2 subunit family | - | Family | |
| PF00483 | Nucleotidyl transferase (NTP_transferase) | Nucleotidyl transferase | - | Family | |
| PF01008 | Initiation factor 2 subunit family (IF-2B) | Initiation factor 2 subunit family | - | Family | |
| PF01008 | Initiation factor 2 subunit family (IF-2B) | Initiation factor 2 subunit family | - | Family |