9PRA | pdb_00009pra

In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
KB [auth Ad]SCOP2B SuperfamilyNucleotidyltransferase-like 8100396 3000129 SCOP2B (2022-06-29)
E [auth 4]SCOP2B SuperfamilyRibosomal protein L36 8083324 3001346 SCOP2B (2022-06-29)
Y [auth O]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8033689 3000995 SCOP2B (2022-06-29)
V [auth L]SCOP2B Superfamily50S Ribosomal protein L14-like 8072072 3000433 SCOP2B (2022-06-29)
B [auth 1]SCOP2B SuperfamilyZn-binding ribosomal proteins 8075050 3001320 SCOP2B (2022-06-29)
Q [auth G]SCOP2B SuperfamilyClpS-like 8098740 3000936 SCOP2B (2022-06-29)
P [auth F]SCOP2B SuperfamilyRibosomal protein L4 8080706 3001146 SCOP2B (2022-06-29)
J [auth 9]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like 8053893 3002240 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth 8]RVPe9pra81 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
H [auth 7]RVPe9pra71 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
G [auth 6]RVPe9pra61 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
F [auth 5]RVPe9pra51 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
MB [auth Af]RVPe9praAf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
JB [auth a]RVPe9praa1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
HB [auth s]RVPe9pras1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
GB [auth p]RVPe9prap1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
FB [auth c]RVPe9prac1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
E [auth 4]RVPe9pra41 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
CB [auth z]RVPe9praz1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
VA [auth r]RVPe9prar1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
UA [auth q]RVPe9praq1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
TA [auth o]RVPe9prao1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
RA [auth m]RVPe9pram1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
OA [auth j]RVPe9praj1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
NA [auth i]RVPe9prai1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
D [auth 3]RVPe9pra31 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
MA [auth h]RVPe9prah1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
LA [auth g]RVPe9prag1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
KA [auth b]RVPe9prab1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
JA [auth Z]RVPe9praZ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
IA [auth Y]RVPe9praY1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
HA [auth X]RVPe9praX1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
GA [auth W]RVPe9praW1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
FA [auth V]RVPe9praV1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
EA [auth U]RVPe9praU1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
DA [auth T]RVPe9praT1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
C [auth 2]RVPe9pra21 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
CA [auth S]RVPe9praS1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
BA [auth R]RVPe9praR1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
AA [auth Q]RVPe9praQ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
Z [auth P]RVPe9praP1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
Y [auth O]RVPe9praO1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
X [auth N]RVPe9praN1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
W [auth M]RVPe9praM1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
V [auth L]RVPe9praL1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
T [auth J]RVPe9praJ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
B [auth 1]RVPe9pra11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
S [auth I]RVPe9praI1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
R [auth H]RVPe9praH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
ZA [auth w]RVPe9praw1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
YA [auth v]RVPe9prav1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
XA [auth u]RVPe9prau1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
WA [auth t]RVPe9prat1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
Q [auth G]RVPe9praG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
BB [auth y]RVPe9pray1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
AB [auth x]RVPe9prax1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
P [auth F]RVPe9praF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
O [auth E]RVPe9praE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
N [auth D]RVPe9praD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
M [auth f]RVPe9praf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
L [auth e]RVPe9prae1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
K [auth d]RVPe9prad1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
J [auth 9]RVPe9pra91 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
A [auth 0]RVPe9pra01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth 6]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding proteinDomain
NB [auth B]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
F [auth 5]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
E [auth 4]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
D [auth 3]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
JA [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
JA [auth Z]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
IA [auth Y]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
IA [auth Y]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
HA [auth X]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
HA [auth X]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
GA [auth W]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
FA [auth V]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
FA [auth V]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
FA [auth V]PF00467KOW motif (KOW)KOW motif- Family
EA [auth U]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
EA [auth U]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
DA [auth T]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
DA [auth T]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
C [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
CA [auth S]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
BA [auth R]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
BA [auth R]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
AA [auth Q]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
Z [auth P]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
Y [auth O]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
Y [auth O]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
X [auth N]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
W [auth M]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
V [auth L]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
V [auth L]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
U [auth K]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
U [auth K]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
T [auth J]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
T [auth J]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
T [auth J]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
B [auth 1]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
S [auth I]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
S [auth I]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
R [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
R [auth H]PF22078Large ribosomal subunit protein bL9m C-terminal domain (Ribosomal_bL9m_C)Large ribosomal subunit protein bL9m C-terminal domainThis entry represents a presumed domain found at the C-terminal of the large ribosomal subunit protein bL9m (mitochondrial) from animals. This domain may adopt a similar fold than prokaryotic large ribosomal subunit protein bL9. Domain
R [auth H]PF25131Large ribosomal subunit protein bL9m N-terminal domain (bL9m_N)Large ribosomal subunit protein bL9m N-terminal domainThis is a presumed domain found at the very N-terminal of Large ribosomal subunit protein bL9m from animals, a structural component of the large subunit of the ribosome. According to structure predictions, it may consist in a hairpin with two beta-sh ...This is a presumed domain found at the very N-terminal of Large ribosomal subunit protein bL9m from animals, a structural component of the large subunit of the ribosome. According to structure predictions, it may consist in a hairpin with two beta-sheets at each ends connected by a loop.
Domain
R [auth H]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].
Domain
PF05046Mitochondrial large subunit ribosomal protein (Img2) (Img2)Mitochondrial large subunit ribosomal protein (Img2)This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1]. Domain
PF00542Ribosomal protein L7/L12 C-terminal domain (Ribosomal_L12)Ribosomal protein L7/L12 C-terminal domainDomain
P [auth F]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
P [auth F]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
O [auth E]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
O [auth E]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
N [auth D]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
N [auth D]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
N [auth D]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
A [auth 0]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth 8]39S ribosomal protein L40, mitochondrial
H [auth 7]39S ribosomal protein L39, mitochondrial
G [auth 6]39S ribosomal protein L38, mitochondrial-
NB [auth B]mitochondrial tRNAVal---
F [auth 5]39S ribosomal protein L37, mitochondrial
MB [auth Af]Acyl carrier protein, mitochondrial
LB [auth Ae]Mitochondrial ribosome and complex I assembly factor AltMIEF1
KB [auth Ad]Mitochondrial assembly of ribosomal large subunit protein 1
JB [auth a]39S ribosomal protein L42, mitochondrial
IB [auth OX]Mitochondrial inner membrane protein OXA1L
HB [auth s]39S ribosomal protein S30, mitochondrial
GB [auth p]Peptidyl-tRNA hydrolase ICT1, mitochondrial
FB [auth c]39S ribosomal protein L44, mitochondrial
EB [auth A]16S mitochondrial rRNA---
DB [auth Ag]Elongation factor Tu, mitochondrial
E [auth 4]39S ribosomal protein L36, mitochondrial
CB [auth z]Large ribosomal subunit protein uL1m
VA [auth r]39S ribosomal protein S18a, mitochondrial
UA [auth q]Growth arrest and DNA damage-inducible proteins-interacting protein 1
TA [auth o]Ribosomal protein 63, mitochondrial
SA [auth n]Nascent polypeptide---
RA [auth m]39S ribosomal protein L55, mitochondrial
QA [auth l]39S ribosomal protein L54, mitochondrial
PA [auth k]Large ribosomal subunit protein mL53-
OA [auth j]39S ribosomal protein L52, mitochondrial
NA [auth i]39S ribosomal protein L51, mitochondrial
D [auth 3]39S ribosomal protein L35, mitochondrial
MA [auth h]39S ribosomal protein L50, mitochondrial-
LA [auth g]39S ribosomal protein L49, mitochondrial
KA [auth b]39S ribosomal protein L43, mitochondrial
JA [auth Z]39S ribosomal protein L30, mitochondrial
IA [auth Y]39S ribosomal protein L47, mitochondrial
HA [auth X]39S ribosomal protein L28, mitochondrial
GA [auth W]39S ribosomal protein L27, mitochondrial
FA [auth V]39S ribosomal protein L24, mitochondrial
EA [auth U]39S ribosomal protein L23, mitochondrial
DA [auth T]39S ribosomal protein L22, mitochondrial
C [auth 2]39S ribosomal protein L34, mitochondrial
CA [auth S]39S ribosomal protein L21, mitochondrial
BA [auth R]39S ribosomal protein L20, mitochondrial
AA [auth Q]39S ribosomal protein L19, mitochondrial
Z [auth P]39S ribosomal protein L18, mitochondrial
Y [auth O]39S ribosomal protein L17, mitochondrial
X [auth N]39S ribosomal protein L16, mitochondrial
W [auth M]39S ribosomal protein L15, mitochondrial
V [auth L]39S ribosomal protein L14, mitochondrial
U [auth K]Large ribosomal subunit protein uL13m
T [auth J]39S ribosomal protein L11, mitochondrial
B [auth 1]39S ribosomal protein L33, mitochondrial
S [auth I]39S ribosomal protein L10, mitochondrial
R [auth H]39S ribosomal protein L9, mitochondrial
39S ribosomal protein L12, mitochondrial
P [auth F]39S ribosomal protein L4, mitochondrial
O [auth E]39S ribosomal protein L3, mitochondrial
N [auth D]39S ribosomal protein L2, mitochondrial
M [auth f]39S ribosomal protein L48, mitochondrial-
L [auth e]39S ribosomal protein L46, mitochondrial
K [auth d]39S ribosomal protein L45, mitochondrial
J [auth 9]39S ribosomal protein L41, mitochondrial
A [auth 0]39S ribosomal protein L32, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth 8]IPR019192Large ribosomal subunit protein mL40Family
I [auth 8]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
H [auth 7]IPR012676TGS-likeHomologous Superfamily
H [auth 7]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
H [auth 7]IPR050062Proline-tRNA synthetaseFamily
H [auth 7]IPR004095TGSDomain
H [auth 7]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
G [auth 6]IPR036610PEBP-like superfamilyHomologous Superfamily
G [auth 6]IPR008914Phosphatidylethanolamine-binding proteinFamily
G [auth 6]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
F [auth 5]IPR052482Mitochondrial large ribosomal subunit mL37Family
F [auth 5]IPR010793Large ribosomal subunit protein mL37/mL65Family
MB [auth Af]IPR006162Phosphopantetheine attachment sitePTM
MB [auth Af]IPR009081Phosphopantetheine binding ACP domainDomain
MB [auth Af]IPR036736ACP-like superfamilyHomologous Superfamily
MB [auth Af]IPR003231Acyl carrier proteinFamily
LB [auth Ae]IPR008011Complex 1 LYR protein domainDomain
LB [auth Ae]IPR045300MIEF1-MP, LYR domainDomain
KB [auth Ad]IPR043519Nucleotidyltransferase superfamilyHomologous Superfamily
KB [auth Ad]IPR004394Protein Iojap/ribosomal silencing factor RsfSFamily
JB [auth a]IPR019346Large ribosomal subunit protein mL42Family
IB [auth OX]IPR001708Membrane insertase YidC/ALB3/OXA1/COX18Family
IB [auth OX]IPR028055Membrane insertase YidC/Oxa/ALB, C-terminalDomain
HB [auth s]IPR039982Large ribosomal subunit protein mL65Family
HB [auth s]IPR010793Large ribosomal subunit protein mL37/mL65Family
GB [auth p]IPR000352Peptide chain release factor class IDomain
GB [auth p]IPR052104Mitochondrial Release Factor mL62Family
FB [auth c]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
FB [auth c]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
FB [auth c]IPR055189Large ribosomal subunit protein mL44, endonuclease domainDomain
FB [auth c]IPR014720Double-stranded RNA-binding domainDomain
DB [auth Ag]IPR000795Translational (tr)-type GTP-binding domainDomain
DB [auth Ag]IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalHomologous Superfamily
DB [auth Ag]IPR004161Translation elongation factor EFTu-like, domain 2Domain
DB [auth Ag]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DB [auth Ag]IPR004160Translation elongation factor EFTu/EF1A, C-terminalDomain
DB [auth Ag]IPR041709Elongation factor Tu (EF-Tu), GTP-binding domainDomain
DB [auth Ag]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
DB [auth Ag]IPR033720Elongation factor Tu, domain 2Domain
DB [auth Ag]IPR031157Tr-type G domain, conserved siteConserved Site
DB [auth Ag]IPR004541Translation elongation factor EFTu/EF1A, bacterial/organelleFamily
DB [auth Ag]IPR050055Elongation factor Tu GTPaseFamily
E [auth 4]IPR000473Large ribosomal subunit protein bL36Family
E [auth 4]IPR052143Mitochondrial Large Ribosomal Subunit bL36mFamily
E [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
CB [auth z]IPR005879Large ribosomal subunit protein uL1, mitochondrialFamily
CB [auth z]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
CB [auth z]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
CB [auth z]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
VA [auth r]IPR001648Small ribosomal subunit protein bS18Family
VA [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
UA [auth q]IPR018472Large ribosomal subunit protein mL64Family
UA [auth q]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
TA [auth o]IPR016576Large ribosomal subunit protein mL63Family
RA [auth m]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
RA [auth m]IPR018615Large ribosomal subunit protein mL55Family
QA [auth l]IPR013870Large ribosomal subunit protein mL54Family
PA [auth k]IPR019716Large ribosomal subunit protein mL53Family
PA [auth k]IPR052473Mitochondrial Large Ribosomal Subunit mL53Family
OA [auth j]IPR034596Large ribosomal subunit protein mL52Family
NA [auth i]IPR019373Large ribosomal subunit protein mL51Family
D [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
D [auth 3]IPR019338Large ribosomal subunit protein bL35mFamily
D [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
MA [auth h]IPR018305Large ribosomal subunit protein mL50Family
LA [auth g]IPR007740Large ribosomal subunit protein mL49Family
KA [auth b]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
KA [auth b]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
KA [auth b]IPR039927Large ribosomal subunit protein mL43Family
JA [auth Z]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
JA [auth Z]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
JA [auth Z]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IA [auth Y]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
IA [auth Y]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
HA [auth X]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
HA [auth X]IPR026569Large ribosomal subunit protein bL28Family
HA [auth X]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
GA [auth W]IPR001684Large ribosomal subunit protein bL27Family
FA [auth V]IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
FA [auth V]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FA [auth V]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FA [auth V]IPR003256Large ribosomal subunit protein uL24Family
FA [auth V]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
FA [auth V]IPR005824KOWDomain
FA [auth V]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
EA [auth U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
EA [auth U]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
EA [auth U]IPR013025Large ribosomal subunit protein uL23-likeFamily
DA [auth T]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
DA [auth T]IPR001063Large ribosomal subunit protein uL22Family
DA [auth T]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
C [auth 2]IPR000271Large ribosomal subunit protein bL34Family
CA [auth S]IPR028909Large ribosomal subunit protein bL21-likeFamily
CA [auth S]IPR001787Large ribosomal subunit protein bL21Family
CA [auth S]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
BA [auth R]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
BA [auth R]IPR005813Large ribosomal subunit protein bL20Family
AA [auth Q]IPR001857Large ribosomal subunit protein bL19Family
AA [auth Q]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
AA [auth Q]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Z [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
Z [auth P]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
Z [auth P]IPR057268Large ribosomal subunit protein uL18Family
Y [auth O]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
Y [auth O]IPR000456Large ribosomal subunit protein bL17Family
X [auth N]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
X [auth N]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
X [auth N]IPR016180Large ribosomal subunit protein uL16 domainDomain
X [auth N]IPR047873Large ribosomal subunit protein uL16Family
W [auth M]IPR021131Large ribosomal subunit protein uL15/eL18Domain
W [auth M]IPR030878Large ribosomal subunit protein uL15Family
W [auth M]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
W [auth M]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
V [auth L]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
V [auth L]IPR000218Large ribosomal subunit protein uL14Family
U [auth K]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
U [auth K]IPR005822Large ribosomal subunit protein uL13Family
U [auth K]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
U [auth K]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
T [auth J]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
T [auth J]IPR000911Ribosomal protein uL11Family
T [auth J]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
T [auth J]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
T [auth J]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
T [auth J]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
B [auth 1]IPR052008Mitochondrial ribosomal protein bL33Family
B [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
B [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
B [auth 1]IPR001705Large ribosomal subunit protein bL33Family
S [auth I]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
S [auth I]IPR001790Large ribosomal subunit protein uL10, N-terminalDomain
S [auth I]IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
R [auth H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
R [auth H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
R [auth H]IPR054302Large ribosomal subunit protein bL9m, C-terminal domainDomain
R [auth H]IPR056864Large ribosomal subunit protein bL9m, N-terminal domainDomain
R [auth H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
R [auth H]IPR000244Large ribosomal subunit protein bL9Family
IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
IPR000206Large ribosomal subunit protein bL12Family
P [auth F]IPR013005Large ribosomal subunit protein uL4-likeFamily
P [auth F]IPR002136Large ribosomal subunit protein uL4Family
P [auth F]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
O [auth E]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
O [auth E]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
O [auth E]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
O [auth E]IPR000597Large ribosomal subunit protein uL3Family
N [auth D]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
N [auth D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth D]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
N [auth D]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
N [auth D]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
N [auth D]IPR002171Large ribosomal subunit protein uL2Family
M [auth f]IPR027486Small ribosomal subunit protein uS10 domainDomain
M [auth f]IPR027487Large ribosomal subunit protein mL48Family
M [auth f]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
L [auth e]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
L [auth e]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
L [auth e]IPR040008Large ribosomal subunit protein mL46Family
L [auth e]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
K [auth d]IPR032710NTF2-like domain superfamilyHomologous Superfamily
K [auth d]IPR007379Tim44-like domainDomain
K [auth d]IPR051975Mitochondrial Large Ribosomal Subunit mL45Family
J [auth 9]IPR019189Large ribosomal subunit protein mL41Family
A [auth 0]IPR002677Large ribosomal subunit protein bL32Family
A [auth 0]IPR051991Mitochondrial ribosomal protein bL32Family
A [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
I [auth 8]Q9NQ50
H [auth 7]Q9NYK5
F [auth 5]Q9BZE1
MB [auth Af]O14561
LB [auth Ae]L0R8F8
KB [auth Ad]Q96EH3
JB [auth a]Q9Y6G3
IB [auth OX]Q15070
HB [auth s]Q9NP92
GB [auth p]Q14197
FB [auth c]Q9H9J2
DB [auth Ag]P49411
E [auth 4]Q9P0J6
CB [auth z]Q9BYD6
VA [auth r]Q9NVS2
UA [auth q]Q8TAE8
TA [auth o]Q9BQC6
RA [auth m]Q7Z7F7
QA [auth l]Q6P161
OA [auth j]Q86TS9
NA [auth i]Q4U2R6
D [auth 3]Q9NZE8
MA [auth h]Q8N5N7
LA [auth g]Q13405
KA [auth b]Q8N983
JA [auth Z]Q8TCC3
IA [auth Y]Q9HD33
HA [auth X]Q13084
GA [auth W]Q9P0M9
FA [auth V]Q96A35
EA [auth U]Q16540
DA [auth T]Q9NWU5
C [auth 2]Q9BQ48
BA [auth R]Q9BYC9
AA [auth Q]P49406
Z [auth P]Q9H0U6
Y [auth O]Q9NRX2
X [auth N]Q9NX20
W [auth M]Q9P015
V [auth L]Q6P1L8
T [auth J]Q9Y3B7
B [auth 1]O75394
S [auth I]Q7Z7H8
R [auth H]Q9BYD2
P52815
P [auth F]Q9BYD3
O [auth E]P09001
N [auth D]Q5T653
M [auth f]Q96GC5
K [auth d]Q9BRJ2
J [auth 9]Q8IXM3
A [auth 0]Q9BYC8

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
NB [auth B]1MA Parent Component: A

NB [auth B]2MG Parent Component: G

NB [auth B]PSU Parent Component: U

MB [auth Af]4HH Parent Component: SER

EB [auth A]1MA Parent Component: A

EB [auth A]OMG Parent Component: G

EB [auth A]OMU Parent Component: U

EB [auth A]PSU Parent Component: U

SA [auth n]UNK
PA [auth k]ACE AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

:  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359
U [auth K]ACE AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

:  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 , N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359