9OUP | pdb_00009oup

Native GABA-A receptor from rat cerebella, beta2-alpha1-beta1-alpha6-gamma2 subtype, in complex with GABA


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth L]RVPe9oupL1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
F [auth H]RVPe9oupH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
ARVPe9oupA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
G [auth L]Light ChainIGKV6 Kappagamma-aminobutyric acid receptor subunit alpha-1SAbDab (2026-06-12)
F [auth H]Heavy ChainIGHV1 -gamma-aminobutyric acid receptor subunit alpha-1SAbDab (2026-06-12)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domainThis family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure. Domain
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domainThis family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure. Domain
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domainThis family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure. Domain
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domainThis family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure. Domain
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domainThis family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
G [auth L]8E3 fab light chain---
F [auth H]8E3 fab heavy chain---
Gamma-aminobutyric acid receptor subunit beta-2
Gamma-aminobutyric acid receptor subunit gamma-2
Gamma-aminobutyric acid receptor subunit alpha-6
Gamma-aminobutyric acid receptor subunit beta-1
Gamma-aminobutyric acid receptor subunit alpha-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
IPR002289Gamma-aminobutyric-acid A receptor, beta subunitFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR006201Neurotransmitter-gated ion-channelFamily
IPR005437Gamma-aminobutyric acid receptor subunit gamma-1/4Family
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
IPR005439Gamma-aminobutyric-acid A receptor, gamma 2 subunitFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR006201Neurotransmitter-gated ion-channelFamily
IPR001390Gamma-aminobutyric-acid A receptor, alpha subunitFamily
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR047024Gamma-aminobutyric acid receptor subunit alpha 1-6, transmembrane domainDomain
IPR005436Gamma-aminobutyric-acid A receptor, alpha 6 subunitFamily
IPR006201Neurotransmitter-gated ion-channelFamily
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
IPR002289Gamma-aminobutyric-acid A receptor, beta subunitFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR006201Neurotransmitter-gated ion-channelFamily
IPR001390Gamma-aminobutyric-acid A receptor, alpha subunitFamily
IPR005431Gamma-aminobutyric-acid A receptor, alpha 1 subunitFamily
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR047024Gamma-aminobutyric acid receptor subunit alpha 1-6, transmembrane domainDomain
IPR047079Gamma-aminobutyric acid receptor subunit alpha-1, extracellular domainDomain
IPR006201Neurotransmitter-gated ion-channelFamily