9OLF | pdb_00009olf

Membrane-associated human mitoribosome in complex with TACO1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth 1]SCOP2B SuperfamilyZn-binding ribosomal proteins 8075050 3001320 SCOP2B (2022-06-29)
E [auth 4]SCOP2B SuperfamilyRibosomal protein L36 8083324 3001346 SCOP2B (2022-06-29)
J [auth 9]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like 8053893 3002240 SCOP2B (2022-06-29)
L [auth A0]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8091481 3000334 SCOP2B (2022-06-29)
T [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063850 3001397 SCOP2B (2022-06-29)
AA [auth AI]SCOP2B SuperfamilyTranslational machinery components 8098948 3000571 SCOP2B (2022-06-29)
BA [auth AJ]SCOP2B SuperfamilyNucleic acid-binding proteins 8095431 3000135 SCOP2B (2022-06-29)
CA [auth AK]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052599 3000068 SCOP2B (2022-06-29)
IA [auth AQ]SCOP2B SuperfamilyRibosomal protein S21 8053089 3002159 SCOP2B (2022-06-29)
JA [auth AR]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S22-like 8051932 3002074 SCOP2B (2022-06-29)
QA [auth AY]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S31-like 8090914 3002471 SCOP2B (2022-06-29)
AB [auth F]SCOP2B SuperfamilyRibosomal protein L4 8080706 3001146 SCOP2B (2022-06-29)
BB [auth G]SCOP2B SuperfamilyClpS-like 8098740 3000936 SCOP2B (2022-06-29)
GB [auth L]SCOP2B Superfamily50S Ribosomal protein L14-like 8072072 3000433 SCOP2B (2022-06-29)
JB [auth O]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8033689 3000995 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth 2]RVPe9olf21 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
D [auth 3]RVPe9olf31 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
F [auth 5]RVPe9olf51 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
G [auth 6]RVPe9olf61 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
I [auth 8]RVPe9olf81 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
L [auth A0]RVPe9olfA01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
O [auth A3]RVPe9olfA31 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
P [auth A4]RVPe9olfA41 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
U [auth AC]RVPe9olfAC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
V [auth AD]RVPe9olfAD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
W [auth AE]RVPe9olfAE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
X [auth AF]RVPe9olfAF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
Y [auth AG]RVPe9olfAG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
Z [auth AH]RVPe9olfAH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
AA [auth AI]RVPe9olfAI1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
BA [auth AJ]RVPe9olfAJ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
CA [auth AK]RVPe9olfAK1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
NA [auth AV]RVPe9olfAV1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
QA [auth AY]RVPe9olfAY1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
RA [auth AZ]RVPe9olfAZ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
UC [auth y]RVPe9olfy1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
TC [auth x]RVPe9olfx1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
RC [auth v]RVPe9olfv1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
QC [auth u]RVPe9olfu1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
BB [auth G]RVPe9olfG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
DB [auth I]RVPe9olfI1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
GB [auth L]RVPe9olfL1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
NB [auth R]RVPe9olfR1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
PB [auth T]RVPe9olfT1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
QB [auth U]RVPe9olfU1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
EC [auth i]RVPe9olfi1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
IC [auth m]RVPe9olfm1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
KC [auth o]RVPe9olfo1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
NC [auth r]RVPe9olfr1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 0]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
B [auth 1]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
C [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
D [auth 3]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
E [auth 4]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
F [auth 5]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
G [auth 6]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding proteinDomain
L [auth A0]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
M [auth A1]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
N [auth A2]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
P [auth A4]PF13812Pentatricopeptide repeat domain (PPR_3)Pentatricopeptide repeat domain- Repeat
P [auth A4]PF22330Small ribosomal subunit protein mS39, PPR (Rib_mS39_PPR)Small ribosomal subunit protein mS39, PPR- Repeat
Q [auth A5]PF01535PPR repeat (PPR)PPR repeat- Repeat
R [auth A6]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.
Domain
T [auth AB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
U [auth AC]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
V [auth AD]PF21251Small ribosomal subunit protein uS5m, N-terminal (Ribosomal_uS5m_N)Small ribosomal subunit protein uS5m, N-terminalThis entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the m ...This entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].
Domain
V [auth AD]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
V [auth AD]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
W [auth AE]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
X [auth AF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
Y [auth AG]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
Z [auth AH]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
AA [auth AI]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
BA [auth AJ]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
CA [auth AK]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
DA [auth AL]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
EA [auth AM]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
FA [auth AN]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
GA [auth AO]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
HA [auth AP]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
IA [auth AQ]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
JA [auth AR]PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
KA [auth AS]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family
LA [auth AT]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
MA [auth AU]PF14943Mitochondrial ribosome subunit S26 (MRP-S26)Mitochondrial ribosome subunit S26- Family
PA [auth AX]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
RA [auth AZ]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
WA [auth B]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
XA [auth C]PF22892MRPL44 dsRNA-binding domain (DSRM_MRPL44)MRPL44 dsRNA-binding domainThis double stranded RNA-binding domain is found in the Large ribosomal subunit protein mL44 protein. Domain
XA [auth C]PF01709TACO1/YebC second and third domain (Transcrip_reg)TACO1/YebC second and third domainThis is a family of transcriptional regulators. In mammals, it activates the transcription of mitochondrially-encoded COX1 [2]. In bacteria, it negatively regulates the quorum-sensing response regulator by binding to its promoter region [3]. This ent ...This is a family of transcriptional regulators. In mammals, it activates the transcription of mitochondrially-encoded COX1 [2]. In bacteria, it negatively regulates the quorum-sensing response regulator by binding to its promoter region [3]. This entry represents the second and third domains in this protein, with one domain nested within the other.
Domain
XA [auth C]PF22935Large ribosomal subunit protein mL44, endonuclease domain (RM44_endonuclase)Large ribosomal subunit protein mL44, endonuclease domainLarge ribosomal subunit protein mL44 (RM44) is a component of the 39S subunit of mitochondrial ribosome. It may play a role in the assembly/stability of nascent mitochondrial polypeptides exiting the ribosome. This entry represents the endonuclease ( ...Large ribosomal subunit protein mL44 (RM44) is a component of the 39S subunit of mitochondrial ribosome. It may play a role in the assembly/stability of nascent mitochondrial polypeptides exiting the ribosome. This entry represents the endonuclease (RNase III-like) domain [1-3].
Domain
YA [auth D]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
YA [auth D]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
YA [auth D]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
ZA [auth E]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
ZA [auth E]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
AB [auth F]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
AB [auth F]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PF05046Mitochondrial large subunit ribosomal protein (Img2) (Img2)Mitochondrial large subunit ribosomal protein (Img2)This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1]. Domain
PF00542Ribosomal protein L7/L12 C-terminal domain (Ribosomal_L12)Ribosomal protein L7/L12 C-terminal domainDomain
CB [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
CB [auth H]PF22078Large ribosomal subunit protein bL9m C-terminal domain (Ribosomal_bL9m_C)Large ribosomal subunit protein bL9m C-terminal domainThis entry represents a presumed domain found at the C-terminal of the large ribosomal subunit protein bL9m (mitochondrial) from animals. This domain may adopt a similar fold than prokaryotic large ribosomal subunit protein bL9. Domain
CB [auth H]PF25131Large ribosomal subunit protein bL9m N-terminal domain (bL9m_N)Large ribosomal subunit protein bL9m N-terminal domainThis is a presumed domain found at the very N-terminal of Large ribosomal subunit protein bL9m from animals, a structural component of the large subunit of the ribosome. According to structure predictions, it may consist in a hairpin with two beta-sh ...This is a presumed domain found at the very N-terminal of Large ribosomal subunit protein bL9m from animals, a structural component of the large subunit of the ribosome. According to structure predictions, it may consist in a hairpin with two beta-sheets at each ends connected by a loop.
Domain
CB [auth H]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].
Domain
DB [auth I]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
DB [auth I]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
EB [auth J]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
EB [auth J]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
EB [auth J]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
FB [auth K]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
FB [auth K]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
GB [auth L]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
GB [auth L]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
HB [auth M]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
IB [auth N]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
JB [auth O]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
JB [auth O]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
KB [auth OX]PF0209660Kd inner membrane protein (60KD_IMP)60Kd inner membrane proteinDomain
LB [auth P]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
MB [auth Q]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
NB [auth R]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
NB [auth R]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
OB [auth S]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
PB [auth T]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
PB [auth T]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
QB [auth U]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
QB [auth U]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
RB [auth V]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
RB [auth V]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
RB [auth V]PF00467KOW motif (KOW)KOW motif- Family
SB [auth W]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
TB [auth X]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
TB [auth X]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
UB [auth Y]PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. Domain
UB [auth Y]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
VB [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
VB [auth Z]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]39S ribosomal protein L32, mitochondrial
B [auth 1]39S ribosomal protein L33, mitochondrial
C [auth 2]39S ribosomal protein L34, mitochondrial
D [auth 3]39S ribosomal protein L35, mitochondrial
E [auth 4]39S ribosomal protein L36, mitochondrial
F [auth 5]39S ribosomal protein L37, mitochondrial
G [auth 6]39S ribosomal protein L38, mitochondrial-
H [auth 7]39S ribosomal protein L39, mitochondrial
I [auth 8]39S ribosomal protein L40, mitochondrial
J [auth 9]39S ribosomal protein L41, mitochondrial
K [auth A]16S mitochondrial rRNA---
L [auth A0]Small ribosomal subunit protein mS34
M [auth A1]28S ribosomal protein S35, mitochondrial
N [auth A2]Small ribosomal subunit protein mS37
O [auth A3]Aurora kinase A-interacting protein-
P [auth A4]Pentatricopeptide repeat domain-containing protein 3, mitochondrial
Q [auth A5]Leucine-rich PPR motif-containing protein, mitochondrial
R [auth A6]SRA stem-loop-interacting RNA-binding protein, mitochondrial
S [auth AA]12S mitochondrial rRNA---
T [auth AB]28S ribosomal protein S2, mitochondrial
U [auth AC]28S ribosomal protein S24, mitochondrial
V [auth AD]28S ribosomal protein S5, mitochondrial
W [auth AE]28S ribosomal protein S6, mitochondrial
X [auth AF]28S ribosomal protein S7, mitochondrial
Y [auth AG]28S ribosomal protein S9, mitochondrial
Z [auth AH]28S ribosomal protein S10, mitochondrial-
AA [auth AI]28S ribosomal protein S11, mitochondrial
BA [auth AJ]28S ribosomal protein S12, mitochondrial
CA [auth AK]28S ribosomal protein S14, mitochondrial
DA [auth AL]28S ribosomal protein S15, mitochondrial
EA [auth AM]28S ribosomal protein S16, mitochondrial
FA [auth AN]28S ribosomal protein S17, mitochondrial
GA [auth AO]28S ribosomal protein S18b, mitochondrial
HA [auth AP]28S ribosomal protein S18c, mitochondrial
IA [auth AQ]Small ribosomal subunit protein bS21m
JA [auth AR]28S ribosomal protein S22, mitochondrial
KA [auth AS]28S ribosomal protein S23, mitochondrial
LA [auth AT]28S ribosomal protein S25, mitochondrial
MA [auth AU]28S ribosomal protein S26, mitochondrial
NA [auth AV]28S ribosomal protein S27, mitochondrial
OA [auth AW]28S ribosomal protein S28, mitochondrial
PA [auth AX]28S ribosomal protein S29, mitochondrial
QA [auth AY]28S ribosomal protein S31, mitochondrial
RA [auth AZ]28S ribosomal protein S33, mitochondrial
SA [auth Aw]A/A-tRNA---
TA [auth Ax]P/P-tRNA---
UA [auth Ay]E/E-tRNA---
VA [auth Az]mRNA---
WA [auth B]RNA (73-MER)mitochondrial tRNAVal---
XA [auth C]Translational activator of cytochrome c oxidase 1
YA [auth D]39S ribosomal protein L2, mitochondrial
ZA [auth E]39S ribosomal protein L3, mitochondrial
AB [auth F]39S ribosomal protein L4, mitochondrial
39S ribosomal protein L12, mitochondrial
CB [auth H]39S ribosomal protein L9, mitochondrial
DB [auth I]39S ribosomal protein L10, mitochondrial
EB [auth J]39S ribosomal protein L11, mitochondrial
FB [auth K]Large ribosomal subunit protein uL13m
GB [auth L]39S ribosomal protein L14, mitochondrial
HB [auth M]39S ribosomal protein L15, mitochondrial
IB [auth N]39S ribosomal protein L16, mitochondrial
JB [auth O]39S ribosomal protein L17, mitochondrial
KB [auth OX]Mitochondrial inner membrane protein OXA1L
LB [auth P]39S ribosomal protein L18, mitochondrial
MB [auth Q]39S ribosomal protein L19, mitochondrial
NB [auth R]39S ribosomal protein L20, mitochondrial
OB [auth S]39S ribosomal protein L21, mitochondrial
PB [auth T]39S ribosomal protein L22, mitochondrial
QB [auth U]39S ribosomal protein L23, mitochondrial
RB [auth V]39S ribosomal protein L24, mitochondrial
SB [auth W]39S ribosomal protein L27, mitochondrial
TB [auth X]39S ribosomal protein L28, mitochondrial
UB [auth Y]39S ribosomal protein L47, mitochondrial
VB [auth Z]39S ribosomal protein L30, mitochondrial
WB [auth a]39S ribosomal protein L42, mitochondrial
XB [auth b]39S ribosomal protein L43, mitochondrial
YB [auth c]39S ribosomal protein L44, mitochondrial
ZB [auth d]39S ribosomal protein L45, mitochondrial
AC [auth e]39S ribosomal protein L46, mitochondrial
BC [auth f]39S ribosomal protein L48, mitochondrial-
CC [auth g]39S ribosomal protein L49, mitochondrial
DC [auth h]39S ribosomal protein L50, mitochondrial-
EC [auth i]39S ribosomal protein L51, mitochondrial
FC [auth j]39S ribosomal protein L52, mitochondrial
GC [auth k]Large ribosomal subunit protein mL53-
HC [auth l]39S ribosomal protein L54, mitochondrial
IC [auth m]39S ribosomal protein L55, mitochondrial
JC [auth n]Nascent polypeptide---
KC [auth o]Ribosomal protein 63, mitochondrial
LC [auth p]Peptidyl-tRNA hydrolase ICT1, mitochondrial
MC [auth q]Growth arrest and DNA damage-inducible proteins-interacting protein 1
NC [auth r]39S ribosomal protein S18a, mitochondrial
OC [auth s]39S ribosomal protein S30, mitochondrial
VC [auth z]Large ribosomal subunit protein uL1m

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0]IPR002677Large ribosomal subunit protein bL32Family
A [auth 0]IPR051991Mitochondrial ribosomal protein bL32Family
A [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
B [auth 1]IPR052008Mitochondrial ribosomal protein bL33Family
B [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
B [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
B [auth 1]IPR001705Large ribosomal subunit protein bL33Family
C [auth 2]IPR000271Large ribosomal subunit protein bL34Family
D [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
D [auth 3]IPR019338Large ribosomal subunit protein bL35mFamily
D [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
E [auth 4]IPR000473Large ribosomal subunit protein bL36Family
E [auth 4]IPR052143Mitochondrial Large Ribosomal Subunit bL36mFamily
E [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
F [auth 5]IPR052482Mitochondrial large ribosomal subunit mL37Family
F [auth 5]IPR010793Large ribosomal subunit protein mL37/mL65Family
G [auth 6]IPR036610PEBP-like superfamilyHomologous Superfamily
G [auth 6]IPR008914Phosphatidylethanolamine-binding proteinFamily
G [auth 6]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
H [auth 7]IPR012676TGS-likeHomologous Superfamily
H [auth 7]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
H [auth 7]IPR050062Proline-tRNA synthetaseFamily
H [auth 7]IPR004095TGSDomain
H [auth 7]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
I [auth 8]IPR019192Large ribosomal subunit protein mL40Family
I [auth 8]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
J [auth 9]IPR019189Large ribosomal subunit protein mL41Family
L [auth A0]IPR032053Small ribosomal subunit protein mS34Family
M [auth A1]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
M [auth A1]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
N [auth A2]IPR010625CHCHDomain
N [auth A2]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
N [auth A2]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
O [auth A3]IPR013177Ribosomal protein bS22, C-terminalDomain
P [auth A4]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
P [auth A4]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
P [auth A4]IPR002885Pentatricopeptide repeatRepeat
P [auth A4]IPR055063Small ribosomal subunit protein mS39, PPRRepeat
Q [auth A5]IPR033490Leucine-rich PPR motif-containing proteinFamily
Q [auth A5]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
Q [auth A5]IPR002885Pentatricopeptide repeatRepeat
Q [auth A5]IPR033443PROP1-like, PPR domainDomain
R [auth A6]IPR000504RNA recognition motif domainDomain
R [auth A6]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
R [auth A6]IPR034152SLIRP, RNA recognition motifDomain
R [auth A6]IPR052462SRA stem-loop-interacting RNA-binding protein/Glycine-rich RNA-binding-likeFamily
R [auth A6]IPR035979RNA-binding domain superfamilyHomologous Superfamily
T [auth AB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
T [auth AB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
T [auth AB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
T [auth AB]IPR001865Small ribosomal subunit protein uS2Family
U [auth AC]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
V [auth AD]IPR000851Small ribosomal subunit protein uS5Family
V [auth AD]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
V [auth AD]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
V [auth AD]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
V [auth AD]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
V [auth AD]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
V [auth AD]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
W [auth AE]IPR000529Small ribosomal subunit protein bS6Family
W [auth AE]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
W [auth AE]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
X [auth AF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
X [auth AF]IPR000235Small ribosomal subunit protein uS7Family
X [auth AF]IPR023798Small ribosomal subunit protein uS7 domainDomain
Y [auth AG]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
Y [auth AG]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
Y [auth AG]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
Y [auth AG]IPR000754Small ribosomal subunit protein uS9Family
Y [auth AG]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
Z [auth AH]IPR027486Small ribosomal subunit protein uS10 domainDomain
Z [auth AH]IPR040055Small ribosomal subunit protein uS10mFamily
Z [auth AH]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
AA [auth AI]IPR001971Small ribosomal subunit protein uS11Family
AA [auth AI]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
AA [auth AI]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
BA [auth AJ]IPR006032Small ribosomal subunit protein uS12Family
BA [auth AJ]IPR005679Ribosomal protein uS12, bacteriaFamily
BA [auth AJ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth AK]IPR001209Small ribosomal subunit protein uS14Family
DA [auth AL]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
DA [auth AL]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
DA [auth AL]IPR052137Universal small ribosomal subunit uS15Family
DA [auth AL]IPR000589Small ribosomal subunit protein uS15Family
EA [auth AM]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
EA [auth AM]IPR000307Small ribosomal subunit protein bS16Family
FA [auth AN]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
FA [auth AN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
FA [auth AN]IPR000266Small ribosomal subunit protein uS17Family
GA [auth AO]IPR040054Small ribosomal subunit protein mS40Family
GA [auth AO]IPR001648Small ribosomal subunit protein bS18Family
GA [auth AO]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
HA [auth AP]IPR001648Small ribosomal subunit protein bS18Family
HA [auth AP]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
HA [auth AP]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
IA [auth AQ]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
IA [auth AQ]IPR001911Small ribosomal subunit protein bS21Family
JA [auth AR]IPR019374Small ribosomal subunit protein mS22Family
KA [auth AS]IPR059242Small ribosomal subunit protein mS23, conserved domainDomain
KA [auth AS]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
KA [auth AS]IPR023611Small ribosomal subunit protein mS23, conserved domain, metazoaDomain
LA [auth AT]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
LA [auth AT]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
LA [auth AT]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
MA [auth AU]IPR026140Small ribosomal subunit protein mS26Family
NA [auth AV]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
NA [auth AV]IPR002885Pentatricopeptide repeatRepeat
NA [auth AV]IPR019266Small ribosomal subunit protein mS27Family
NA [auth AV]IPR034913mS27/PTCD2Family
OA [auth AW]IPR019375Small ribosomal subunit protein bS1mFamily
PA [auth AX]IPR019368Small ribosomal subunit protein mS29Family
PA [auth AX]IPR008092Small ribosomal subunit protein mS29, metazoaFamily
PA [auth AX]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
QA [auth AY]IPR026299Mitochondrial 28S ribosomal protein S31Family
RA [auth AZ]IPR013219Small ribosomal subunit protein mS33Family
XA [auth C]IPR017856Integrase-like, N-terminalHomologous Superfamily
XA [auth C]IPR048300TACO1/YebC-like, second and third domainsDomain
XA [auth C]IPR049083TACO1/YebC-like, N-terminal domainDomain
XA [auth C]IPR002876Transcriptional regulator TACO1-likeFamily
XA [auth C]IPR029072YebC-likeHomologous Superfamily
XA [auth C]IPR026564Transcriptional regulator TACO1-like, domain 3Homologous Superfamily
YA [auth D]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
YA [auth D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
YA [auth D]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
YA [auth D]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
YA [auth D]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
YA [auth D]IPR002171Large ribosomal subunit protein uL2Family
ZA [auth E]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
ZA [auth E]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
ZA [auth E]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
ZA [auth E]IPR000597Large ribosomal subunit protein uL3Family
AB [auth F]IPR013005Large ribosomal subunit protein uL4-likeFamily
AB [auth F]IPR002136Large ribosomal subunit protein uL4Family
AB [auth F]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
IPR000206Large ribosomal subunit protein bL12Family
CB [auth H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
CB [auth H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
CB [auth H]IPR054302Large ribosomal subunit protein bL9m, C-terminal domainDomain
CB [auth H]IPR056864Large ribosomal subunit protein bL9m, N-terminal domainDomain
CB [auth H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
CB [auth H]IPR000244Large ribosomal subunit protein bL9Family
DB [auth I]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
DB [auth I]IPR001790Large ribosomal subunit protein uL10, N-terminalDomain
DB [auth I]IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
EB [auth J]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
EB [auth J]IPR000911Ribosomal protein uL11Family
EB [auth J]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
EB [auth J]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
EB [auth J]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
EB [auth J]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
FB [auth K]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
FB [auth K]IPR005822Large ribosomal subunit protein uL13Family
FB [auth K]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
FB [auth K]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
GB [auth L]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
GB [auth L]IPR000218Large ribosomal subunit protein uL14Family
HB [auth M]IPR021131Large ribosomal subunit protein uL15/eL18Domain
HB [auth M]IPR030878Large ribosomal subunit protein uL15Family
HB [auth M]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
HB [auth M]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
IB [auth N]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
IB [auth N]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IB [auth N]IPR016180Large ribosomal subunit protein uL16 domainDomain
IB [auth N]IPR047873Large ribosomal subunit protein uL16Family
JB [auth O]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
JB [auth O]IPR000456Large ribosomal subunit protein bL17Family
KB [auth OX]IPR001708Membrane insertase YidC/ALB3/OXA1/COX18Family
KB [auth OX]IPR028055Membrane insertase YidC/Oxa/ALB, C-terminalDomain
LB [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
LB [auth P]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
LB [auth P]IPR057268Large ribosomal subunit protein uL18Family
MB [auth Q]IPR001857Large ribosomal subunit protein bL19Family
MB [auth Q]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
MB [auth Q]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NB [auth R]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
NB [auth R]IPR005813Large ribosomal subunit protein bL20Family
OB [auth S]IPR028909Large ribosomal subunit protein bL21-likeFamily
OB [auth S]IPR001787Large ribosomal subunit protein bL21Family
OB [auth S]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
PB [auth T]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
PB [auth T]IPR001063Large ribosomal subunit protein uL22Family
PB [auth T]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
QB [auth U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
QB [auth U]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
QB [auth U]IPR013025Large ribosomal subunit protein uL23-likeFamily
RB [auth V]IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
RB [auth V]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
RB [auth V]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RB [auth V]IPR003256Large ribosomal subunit protein uL24Family
RB [auth V]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
RB [auth V]IPR005824KOWDomain
RB [auth V]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
SB [auth W]IPR001684Large ribosomal subunit protein bL27Family
TB [auth X]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
TB [auth X]IPR026569Large ribosomal subunit protein bL28Family
TB [auth X]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
UB [auth Y]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
UB [auth Y]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
VB [auth Z]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
VB [auth Z]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
VB [auth Z]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
WB [auth a]IPR019346Large ribosomal subunit protein mL42Family
XB [auth b]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
XB [auth b]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
XB [auth b]IPR039927Large ribosomal subunit protein mL43Family
YB [auth c]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
YB [auth c]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
YB [auth c]IPR055189Large ribosomal subunit protein mL44, endonuclease domainDomain
YB [auth c]IPR014720Double-stranded RNA-binding domainDomain
ZB [auth d]IPR032710NTF2-like domain superfamilyHomologous Superfamily
ZB [auth d]IPR007379Tim44-like domainDomain
ZB [auth d]IPR051975Mitochondrial Large Ribosomal Subunit mL45Family
AC [auth e]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
AC [auth e]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
AC [auth e]IPR040008Large ribosomal subunit protein mL46Family
AC [auth e]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
BC [auth f]IPR027486Small ribosomal subunit protein uS10 domainDomain
BC [auth f]IPR027487Large ribosomal subunit protein mL48Family
BC [auth f]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
CC [auth g]IPR007740Large ribosomal subunit protein mL49Family
DC [auth h]IPR018305Large ribosomal subunit protein mL50Family
EC [auth i]IPR019373Large ribosomal subunit protein mL51Family
FC [auth j]IPR034596Large ribosomal subunit protein mL52Family
GC [auth k]IPR019716Large ribosomal subunit protein mL53Family
GC [auth k]IPR052473Mitochondrial Large Ribosomal Subunit mL53Family
HC [auth l]IPR013870Large ribosomal subunit protein mL54Family
IC [auth m]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
IC [auth m]IPR018615Large ribosomal subunit protein mL55Family
KC [auth o]IPR016576Large ribosomal subunit protein mL63Family
LC [auth p]IPR000352Peptide chain release factor class IDomain
LC [auth p]IPR052104Mitochondrial Release Factor mL62Family
MC [auth q]IPR018472Large ribosomal subunit protein mL64Family
MC [auth q]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
NC [auth r]IPR001648Small ribosomal subunit protein bS18Family
NC [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
OC [auth s]IPR039982Large ribosomal subunit protein mL65Family
OC [auth s]IPR010793Large ribosomal subunit protein mL37/mL65Family
VC [auth z]IPR005879Large ribosomal subunit protein uL1, mitochondrialFamily
VC [auth z]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
VC [auth z]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
VC [auth z]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth 0]Q9BYC8
B [auth 1]O75394
C [auth 2]Q9BQ48
D [auth 3]Q9NZE8
E [auth 4]Q9P0J6
F [auth 5]Q9BZE1
H [auth 7]Q9NYK5
I [auth 8]Q9NQ50
J [auth 9]Q8IXM3
L [auth A0]P82930
M [auth A1]P82673
N [auth A2]Q96BP2
O [auth A3]Q9NWT8
P [auth A4]Q96EY7
Q [auth A5]P42704
R [auth A6]Q9GZT3
T [auth AB]Q9Y399
V [auth AD]P82675
W [auth AE]P82932
X [auth AF]Q9Y2R9
Y [auth AG]P82933
Z [auth AH]P82664
AA [auth AI]P82912
BA [auth AJ]O15235
CA [auth AK]O60783
DA [auth AL]P82914
EA [auth AM]Q9Y3D3
FA [auth AN]Q9Y2R5
GA [auth AO]Q9Y676
HA [auth AP]Q9Y3D5
IA [auth AQ]P82921
JA [auth AR]P82650
KA [auth AS]Q9Y3D9
LA [auth AT]P82663
NA [auth AV]Q92552
OA [auth AW]Q9Y2Q9
PA [auth AX]P51398
QA [auth AY]Q92665
RA [auth AZ]Q9Y291
XA [auth C]Q9BSH4
YA [auth D]Q5T653
ZA [auth E]P09001
AB [auth F]Q9BYD3
P52815
CB [auth H]Q9BYD2
DB [auth I]Q7Z7H8
EB [auth J]Q9Y3B7
GB [auth L]Q6P1L8
HB [auth M]Q9P015
IB [auth N]Q9NX20
JB [auth O]Q9NRX2
KB [auth OX]Q15070
LB [auth P]Q9H0U6
MB [auth Q]P49406
NB [auth R]Q9BYC9
PB [auth T]Q9NWU5
QB [auth U]Q16540
RB [auth V]Q96A35
SB [auth W]Q9P0M9
TB [auth X]Q13084
UB [auth Y]Q9HD33
VB [auth Z]Q8TCC3
WB [auth a]Q9Y6G3
XB [auth b]Q8N983
YB [auth c]Q9H9J2
ZB [auth d]Q9BRJ2
BC [auth f]Q96GC5
CC [auth g]Q13405
DC [auth h]Q8N5N7
EC [auth i]Q4U2R6
FC [auth j]Q86TS9
HC [auth l]Q6P161
IC [auth m]Q7Z7F7
KC [auth o]Q9BQC6
LC [auth p]Q14197
MC [auth q]Q8TAE8
NC [auth r]Q9NVS2
OC [auth s]Q9NP92
VC [auth z]Q9BYD6

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
K [auth A]1MA Parent Component: A

K [auth A]OMG Parent Component: G

K [auth A]OMU Parent Component: U

K [auth A]PSU Parent Component: U

N [auth A2]ACE AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

:  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359
S [auth AA]5MC Parent Component: C

AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

S [auth AA]5MU Parent Component: U

AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

S [auth AA]B8T Parent Component: C

AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

S [auth AA]MA6 Parent Component: A

AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

IA [auth AQ]ACE AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

:  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 , N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359
WA [auth B]1MA Parent Component: A

AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

WA [auth B]2MG Parent Component: G

AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

WA [auth B]PSU Parent Component: U

AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

FB [auth K]ACE AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

:  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 , N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 , N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359
GC [auth k]ACE AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

:  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 , N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 , N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 , N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359
JC [auth n]UNK AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354