Annotations: 9OK7

cryo-EM structure of human innate immune receptor conformation 1

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF17776	NLRC4 helical domain HD2 (NLRC4_HD2)	NLRC4 helical domain HD2	This entry represents a helical domain found in the NLRC4 protein [2] and NOD2 protein [1].	Domain
A	PF17779	NOD2 winged helix domain (WHD_NOD2)	NOD2 winged helix domain	This winged helix domain is found in the NOD2 protein [1]. Its molecular function is not known.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	NACHT, LRR and PYD domains-containing protein 6	protein-macromolecule adaptor activity molecular adaptor activity signaling adaptor activity RNA binding double-stranded RNA binding binding nucleic acid binding lipid binding lipopolysaccharide binding carbohydrate derivative binding molecular condensate scaffold activity vasopressin receptor activity peptide receptor activity molecular transducer activity protein-macromolecule adaptor activity molecular adaptor activity signaling adaptor activity RNA binding double-stranded RNA binding binding nucleic acid binding lipid binding lipopolysaccharide binding carbohydrate derivative binding molecular condensate scaffold activity vasopressin receptor activity peptide receptor activity molecular transducer activity G protein-coupled receptor activity G protein-coupled peptide receptor activity signaling receptor activity transmembrane signaling receptor activity pattern recognition receptor activity lipoteichoic acid binding peptide binding	multicellular organismal process biological process involved in interspecies interaction between organisms multicellular organismal-level homeostasis homeostatic process host-mediated modulation of intestinal microbiota composition homeostasis of number of cells modulation of process of another organism host-mediated perturbation of symbiont process cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling multicellular organismal process biological process involved in interspecies interaction between organisms multicellular organismal-level homeostasis homeostatic process host-mediated modulation of intestinal microbiota composition homeostasis of number of cells modulation of process of another organism host-mediated perturbation of symbiont process cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process response to interleukin-18 response to cytokine regulation of signal transduction positive regulation of response to cytokine stimulus cytokine-mediated signaling pathway cell communication positive regulation of response to stimulus cellular response to cytokine stimulus signal transduction positive regulation of cellular process regulation of biological process regulation of signaling cell surface receptor signaling pathway cellular response to interleukin-18 regulation of cytokine-mediated signaling pathway biological regulation response to peptide interleukin-18-mediated signaling pathway regulation of response to cytokine stimulus regulation of response to stimulus response to chemical regulation of interleukin-18-mediated signaling pathway positive regulation of interleukin-18-mediated signaling pathway regulation of cell communication cellular process positive regulation of cytokine-mediated signaling pathway positive regulation of signaling regulation of defense response regulation of response to external stimulus defense response response to external stimulus regulation of inflammatory response positive regulation of response to external stimulus positive regulation of inflammatory response regulation of response to stress response to stress positive regulation of defense response inflammatory response acute inflammatory response negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process negative regulation of canonical NF-kappaB signal transduction intracellular signal transduction negative regulation of cell communication regulation of intracellular signal transduction intracellular signaling cassette negative regulation of cellular process negative regulation of response to stimulus negative regulation of signal transduction canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction regulation of MAPK cascade negative regulation of ERK1 and ERK2 cascade MAPK cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade negative regulation of MAPK cascade immune response response to other organism defense response to symbiont response to biotic stimulus defense response to virus immune system process defense response to other organism innate immune response antiviral innate immune response response to external biotic stimulus response to virus negative regulation of inflammatory response inflammatory response to antigenic stimulus regulation of immune system process negative regulation of inflammatory response to antigenic stimulus negative regulation of immune response regulation of inflammatory response to antigenic stimulus negative regulation of immune system process negative regulation of response to external stimulus negative regulation of defense response regulation of immune response positive regulation of response to biotic stimulus pattern recognition receptor signaling pathway cellular component biogenesis immune response-activating signaling pathway cellular component assembly inflammasome-mediated signaling pathway positive regulation of immune response canonical inflammasome complex assembly positive regulation of immune system process innate immune response-activating signaling pathway regulation of innate immune response activation of innate immune response activation of immune response cytoplasmic pattern recognition receptor signaling pathway regulation of response to biotic stimulus intracellular receptor signaling pathway cellular component organization NLRP6 inflammasome complex assembly immune response-regulating signaling pathway protein-containing complex assembly cellular component organization or biogenesis positive regulation of innate immune response protein-containing complex organization protein complex oligomerization protein homooligomerization pyroptotic inflammatory response defense response to Gram-positive bacterium defense response to bacterium response to bacterium	membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane cytoplasm membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane cytoplasm cytosol cell periphery plasma membrane canonical inflammasome complex protein-containing complex NLRP6 inflammasome complex membraneless organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR004020	DAPIN domain	Domain
A	IPR007111	NACHT nucleoside triphosphatase	Domain
A	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A	IPR011029	Death-like domain superfamily	Homologous Superfamily
A	IPR041267	NACHT, LRR and PYD domains-containing protein, helical domain HD2	Domain
A	IPR041075	NOD1/2, winged helix domain	Domain
A	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A	IPR050637	NLRP family, innate immunity and inflammation regulators	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: P59044	benign prostatic hyperplasia Hashimoto thyroiditis brain aneurysm heart disease endogenous depression uterine corpus leiomyoma