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 9NO4 | pdb_00009no4

Cryo-EM structure of Csm/AcrIIIA2/enolase 3:2 complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]DNA_ligase_A_Ne9no4B1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
B [auth E]DNA_ligase_A_Ne9no4E1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
C [auth F]LSDAT_euke9no4F1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: LSDAT_eukECOD (v295.2)
D [auth G]DNA_ligase_A_Ne9no4G1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
F [auth C]LSDAT_euke9no4C1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: LSDAT_eukECOD (v295.2)
G [auth D]DNA_ligase_A_Ne9no4D1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
HDNA_ligase_A_Ne9no4H1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
ILSDAT_euke9no4I1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: LSDAT_eukECOD (v295.2)
JDNA_ligase_A_Ne9no4J1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
L [auth K]DNA_ligase_A_Ne9no4K1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
M [auth L]DNA_ligase_A_Ne9no4L1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
N [auth M]DNA_ligase_A_Ne9no4M1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
ODNA_ligase_A_Ne9no4O1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
PDNA_ligase_A_Ne9no4P1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
QDNA_ligase_A_Ne9no4Q1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
R [auth A]DNA_ligase_A_Ne9no4A1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B]CRISPR system Cms protein Csm4- - -
B [auth E],
C [auth F]
CRISPR system Cms endoribonuclease Csm3- - -
D [auth G]CRISPR system Cms endoribonuclease Csm3- - -
E [auth N]crRNA RNA (35-MER)---
F [auth C],
G [auth D]
CRISPR system Cms protein Csm2- - -
CRISPR system Cms protein Csm5- - -
Enolase
K [auth R]AcrIIIA2- - -
R [auth A]CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A)- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B]IPR005537CRISPR type III-associated proteinDomain
A [auth B]IPR005510CRISPR type III-associated RAMP protein Csm4Family
A [auth B]IPR040932Csm4, C-terminalDomain
B [auth E],
C [auth F]
IPR052216CRISPR_Csm3_endoribonucleaseUnknown
B [auth E],
C [auth F]
IPR013412CRISPR-associated RAMP Csm3Family
B [auth E],
C [auth F]
IPR005537CRISPR type III-associated proteinDomain
D [auth G]IPR052216CRISPR_Csm3_endoribonucleaseUnknown
D [auth G]IPR013412CRISPR-associated RAMP Csm3Family
D [auth G]IPR005537CRISPR type III-associated proteinDomain
F [auth C],
G [auth D]
IPR010149CRISPR-associated protein, Csm2 Type III-AFamily
IPR005537CRISPR type III-associated proteinDomain
IPR010173CRISPR-associated protein Csm5Family
IPR020809Enolase, conserved siteConserved Site
IPR020810Enolase, C-terminal TIM barrel domainDomain
IPR020811Enolase, N-terminalDomain
IPR000941EnolaseFamily
IPR029017Enolase-like, N-terminalHomologous Superfamily
IPR036849Enolase-like, C-terminal domain superfamilyHomologous Superfamily
R [auth A]IPR000160GGDEF domainDomain
R [auth A]IPR013408CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1Family
R [auth A]IPR048693CRISPR RNA silencing complex Cmr2-like, C-terminal domainDomain
R [auth A]IPR052117CRISPR-associated Cas10/Csm1 subtype III-A proteinFamily
R [auth A]IPR041062Csm1, subunit domain BDomain
R [auth A]IPR054767Cas10/Cmr2, second palm domainDomain
R [auth A]IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
R [auth A]IPR006674HD domainDomain