9NBG | pdb_00009nbg

H-1 Parvovirus VLP - Glycan [s(Lex)2]


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ZA [auth z]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
YA [auth y]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
XA [auth x]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
WA [auth w]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
VA [auth v]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
UA [auth u]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
USCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
TA [auth t]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
SA [auth s]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
RA [auth r]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
QA [auth q]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
PA [auth p]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
OA [auth o]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
NA [auth n]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
LA [auth l]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
KA [auth k]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
JA [auth j]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
IA [auth i]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
HB [auth 8]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
HA [auth h]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
GB [auth 7]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
GA [auth g]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
FB [auth 6]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
EB [auth 5]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
DB [auth 4]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
CB [auth 3]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
BB [auth 2]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
AB [auth 1]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyssDNA viruses 8073281 3000931 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ZA [auth z]Beta-Caspe9nbgz1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
ZBeta-Caspe9nbgZ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
YA [auth y]Beta-Caspe9nbgy1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
YBeta-Caspe9nbgY1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
XA [auth x]Beta-Caspe9nbgx1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
XBeta-Caspe9nbgX1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
WA [auth w]Beta-Caspe9nbgw1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
WBeta-Caspe9nbgW1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
VA [auth v]Beta-Caspe9nbgv1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
VBeta-Caspe9nbgV1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
UA [auth u]Beta-Caspe9nbgu1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
UBeta-Caspe9nbgU1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
TA [auth t]Beta-Caspe9nbgt1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
TBeta-Caspe9nbgT1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
SA [auth s]Beta-Caspe9nbgs1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
SBeta-Caspe9nbgS1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
RA [auth r]Beta-Caspe9nbgr1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
RBeta-Caspe9nbgR1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
QA [auth q]Beta-Caspe9nbgq1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
QBeta-Caspe9nbgQ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
PA [auth p]Beta-Caspe9nbgp1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
PBeta-Caspe9nbgP1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
OA [auth o]Beta-Caspe9nbgo1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
OBeta-Caspe9nbgO1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
NA [auth n]Beta-Caspe9nbgn1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
NBeta-Caspe9nbgN1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
MA [auth m]Beta-Caspe9nbgm1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
MBeta-Caspe9nbgM1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
LA [auth l]Beta-Caspe9nbgl1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
LBeta-Caspe9nbgL1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
KA [auth k]Beta-Caspe9nbgk1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
KBeta-Caspe9nbgK1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
JA [auth j]Beta-Caspe9nbgj1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
JBeta-Caspe9nbgJ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
IA [auth i]Beta-Caspe9nbgi1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
IBeta-Caspe9nbgI1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
HB [auth 8]Beta-Caspe9nbg81 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
HA [auth h]Beta-Caspe9nbgh1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
HBeta-Caspe9nbgH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
GB [auth 7]Beta-Caspe9nbg71 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
GA [auth g]Beta-Caspe9nbgg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
GBeta-Caspe9nbgG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
FB [auth 6]Beta-Caspe9nbg61 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
FA [auth f]Beta-Caspe9nbgf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
FBeta-Caspe9nbgF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
EB [auth 5]Beta-Caspe9nbg51 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
EA [auth e]Beta-Caspe9nbge1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
EBeta-Caspe9nbgE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
DB [auth 4]Beta-Caspe9nbg41 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
DA [auth d]Beta-Caspe9nbgd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
DBeta-Caspe9nbgD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
CB [auth 3]Beta-Caspe9nbg31 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
CA [auth c]Beta-Caspe9nbgc1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
CBeta-Caspe9nbgC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
BB [auth 2]Beta-Caspe9nbg21 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
BA [auth b]Beta-Caspe9nbgb1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
BBeta-Caspe9nbgB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
AB [auth 1]Beta-Caspe9nbg11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
AA [auth a]Beta-Caspe9nbga1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
ABeta-Caspe9nbgA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Major capsid protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013607Phospholipase A2-like domainDomain
IPR016184Capsid/spike protein, ssDNA virusHomologous Superfamily
IPR001403Coat protein VP1/VP2, ParvovirusDomain
IPR036952Parvovirus coat protein VP1/VP2Homologous Superfamily