Annotations: 9L6O

CryoEM structure of class Ib Ribonucleotide reductase from Mycobacterium thermoresistibile, conformer D

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth F], D [auth E]	PF02867	Ribonucleotide reductase, barrel domain (Ribonuc_red_lgC)	Ribonucleotide reductase, barrel domain	-	Family
B [auth F], D [auth E]	PF08343	Ribonucleotide reductase N-terminal (RNR_N)	Ribonucleotide reductase N-terminal	-	Family
B [auth F], D [auth E]	PF00317	Ribonucleotide reductase, all-alpha domain (Ribonuc_red_lgN)	Ribonucleotide reductase, all-alpha domain		Domain
A, C [auth B]	PF00268	Ribonucleotide reductase, small chain (Ribonuc_red_sm)	Ribonucleotide reductase, small chain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth F], D [auth E]	Ribonucleoside-diphosphate reductase	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding ribonucleoside-diphosphate reductase activity oxidoreductase activity oxidoreductase activity, acting on CH or CH2 groups oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor catalytic activity	deoxyribonucleotide biosynthetic process deoxyribonucleotide metabolic process biosynthetic process metabolic process cellular process	protein-containing complex cellular anatomical structure intracellular anatomical structure catalytic complex oxidoreductase complex cytoplasm cytosol ribonucleoside-diphosphate reductase complex
A, C [auth B]	Ribonucleoside-diphosphate reductase subunit beta	ribonucleoside-diphosphate reductase activity oxidoreductase activity oxidoreductase activity, acting on CH or CH2 groups oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor catalytic activity cation binding ion binding binding metal ion binding small molecule binding	deoxyribonucleotide biosynthetic process deoxyribonucleotide metabolic process biosynthetic process metabolic process cellular process	protein-containing complex cellular anatomical structure intracellular anatomical structure catalytic complex oxidoreductase complex cytoplasm cytosol ribonucleoside-diphosphate reductase complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth F], D [auth E]	IPR008926	Ribonucleotide reductase R1 subunit, N-terminal	Homologous Superfamily
B [auth F], D [auth E]	IPR013554	Ribonucleotide reductase N-terminal	Domain
B [auth F], D [auth E]	IPR013509	Ribonucleotide reductase large subunit, N-terminal	Domain
B [auth F], D [auth E]	IPR026459	Ribonucleotide reductase, class 1b, subunit NrdE	Family
B [auth F], D [auth E]	IPR013346	Ribonucleotide reductase, class I, alpha subunit, C-terminal	Domain
B [auth F], D [auth E]	IPR000788	Ribonucleotide reductase large subunit, C-terminal	Domain
B [auth F], D [auth E]	IPR039718	Ribonucleoside-diphosphate reductase large subunit	Family
A, C [auth B]	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A, C [auth B]	IPR026494	Ribonucleoside-diphosphate reductase subunit beta	Family
A, C [auth B]	IPR000358	Ribonucleotide reductase small subunit family	Family
A, C [auth B]	IPR030475	Ribonucleotide reductase small subunit, acitve site	Active Site
A, C [auth B]	IPR033909	Ribonucleotide reductase small subunit	Family
A, C [auth B]	IPR012348	Ribonucleotide reductase-like	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9L6O | pdb_00009l6o

CryoEM structure of class Ib Ribonucleotide reductase from Mycobacterium thermoresistibile, conformer D

External Resource: Annotation

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage